Literature DB >> 12618403

piggyBac-based insertional mutagenesis and enhancer detection as a tool for functional insect genomics.

Carsten Horn1, Nils Offen, Sverker Nystedt, Udo Häcker, Ernst A Wimmer.   

Abstract

Transposon mutagenesis provides a fundamental tool for functional genomics. Here we present a non-species-specific, combined enhancer detection and binary expression system based on the transposable element piggyBac: For the different components of this insertional mutagenesis system, we used widely applicable transposons and distinguishable broad-range transformation markers, which should enable this system to be operational in nonmodel arthropods. In a pilot screen in Drosophila melanogaster, piggyBac mutator elements on the X chromosome were mobilized in males by a Hermes-based jumpstarter element providing piggyBac transposase activity under control of the alpha1-tubulin promoter. As primary reporters in the piggyBac mutator elements, we employed the heterologous transactivators GAL4delta or tTA. To identify larval and adult enhancer detectors, strains carrying UASp-EYFP or TRE-EYFP as secondary reporter elements were used. Tissue-specific enhancer activities were readily observed in the GAL4delta/UASp-based systems, but only rarely in the tTA/TRE system. Novel autosomal insertions were recovered with an average jumping rate of 80%. Of these novel insertions, 3.8% showed homozygous lethality, which was reversible by piggyBac excision. Insertions were found in both coding and noncoding regions of characterized genes and also in noncharacterized and non-P-targeted CG-number genes. This indicates that piggyBac will greatly facilitate the intended saturation mutagenesis in Drosophila.

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Year:  2003        PMID: 12618403      PMCID: PMC1462455     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  53 in total

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Journal:  Nucleic Acids Res       Date:  1991-12-11       Impact factor: 16.971

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Journal:  Dev Biol       Date:  1995-08       Impact factor: 3.582

3.  Assay for movement of Lepidopteran transposon IFP2 in insect cells using a baculovirus genome as a target DNA.

Authors:  M J Fraser; L Cary; K Boonvisudhi; H G Wang
Journal:  Virology       Date:  1995-08-20       Impact factor: 3.616

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Authors:  E A Wimmer; H Jäckle; C Pfeifle; S M Cohen
Journal:  Nature       Date:  1993-12-16       Impact factor: 49.962

5.  A functional analysis of the P-element gene-transfer vector in insects.

Authors:  A M Handler; S P Gomez; D A O'Brochta
Journal:  Arch Insect Biochem Physiol       Date:  1993       Impact factor: 1.698

6.  Studies on the rate and site-specificity of P element transposition.

Authors:  C A Berg; A C Spradling
Journal:  Genetics       Date:  1991-03       Impact factor: 4.562

7.  Analysis of genetic mosaics in developing and adult Drosophila tissues.

Authors:  T Xu; G M Rubin
Journal:  Development       Date:  1993-04       Impact factor: 6.868

8.  Targeted gene expression as a means of altering cell fates and generating dominant phenotypes.

Authors:  A H Brand; N Perrimon
Journal:  Development       Date:  1993-06       Impact factor: 6.868

9.  A Drosophila protein related to the human zinc finger transcription factor PRDII/MBPI/HIV-EP1 is required for dpp signaling.

Authors:  K Staehling-Hampton; A S Laughon; F M Hoffmann
Journal:  Development       Date:  1995-10       Impact factor: 6.868

10.  Repression of Drosophila pair-rule segmentation genes by ectopic expression of tramtrack.

Authors:  J L Brown; C Wu
Journal:  Development       Date:  1993-01       Impact factor: 6.868

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  63 in total

1.  piggyBac transposon remobilization and enhancer detection in Anopheles mosquitoes.

Authors:  David A O'Brochta; Robert T Alford; Kristina L Pilitt; Channa U Aluvihare; Robert A Harrell
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

2.  piggyBac-based insertional mutagenesis in the presence of stably integrated P elements in Drosophila.

Authors:  Udo Hacker; Sverker Nystedt; Mojgan Padash Barmchi; Carsten Horn; Ernst A Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-11       Impact factor: 11.205

3.  Site-specific genomic targeting in Drosophila.

Authors:  Carsten Horn; Alfred M Handler
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-22       Impact factor: 11.205

4.  Exploring strategies for protein trapping in Drosophila.

Authors:  Ana T Quiñones-Coello; Lisa N Petrella; Kathleen Ayers; Anthony Melillo; Stacy Mazzalupo; Andrew M Hudson; Shu Wang; Claudia Castiblanco; Michael Buszczak; Roger A Hoskins; Lynn Cooley
Journal:  Genetics       Date:  2006-12-18       Impact factor: 4.562

Review 5.  Not all GMOs are crop plants: non-plant GMO applications in agriculture.

Authors:  K E Hokanson; W O Dawson; A M Handler; M F Schetelig; R J St Leger
Journal:  Transgenic Res       Date:  2013-11-17       Impact factor: 2.788

6.  Site-specific recombination for the modification of transgenic strains of the Mediterranean fruit fly Ceratitis capitata.

Authors:  Marc F Schetelig; Francesca Scolari; Alfred M Handler; Sebastian Kittelmann; Giuliano Gasperi; Ernst A Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-14       Impact factor: 11.205

7.  The nucleosome remodeling factor ISWI functionally interacts with an evolutionarily conserved network of cellular factors.

Authors:  Walter Arancio; Maria C Onorati; Giosalba Burgio; Marianna Collesano; Antonia M R Ingrassia; Swonild I Genovese; Manolis Fanto; Davide F V Corona
Journal:  Genetics       Date:  2010-03-01       Impact factor: 4.562

Review 8.  The neurobiological basis of sleep: Insights from Drosophila.

Authors:  Sarah Ly; Allan I Pack; Nirinjini Naidoo
Journal:  Neurosci Biobehav Rev       Date:  2018-01-31       Impact factor: 8.989

9.  Microinjection of Western Corn Rootworm, Diabrotica virgifera virgifera, Embryos for Germline Transformation, or CRISPR/Cas9 Genome Editing.

Authors:  Fu-Chyun Chu; Pei-Shan Wu; Sofia Pinzi; Nathaniel Grubbs; Marcé D Lorenzen
Journal:  J Vis Exp       Date:  2018-04-27       Impact factor: 1.355

10.  Targeted gene expression using the GAL4/UAS system in the silkworm Bombyx mori.

Authors:  Morikazu Imamura; Junichi Nakai; Satoshi Inoue; Guo Xing Quan; Toshio Kanda; Toshiki Tamura
Journal:  Genetics       Date:  2003-11       Impact factor: 4.562

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