Literature DB >> 12616399

A genome-wide scan for primary open-angle glaucoma (POAG): the Barbados Family Study of Open-Angle Glaucoma.

Barbara Nemesure1, Xiaodong Jiao, Qimei He, M Cristina Leske, Suh-Yuh Wu, Anselm Hennis, Nancy Mendell, Joy Redman, Henri-Jean Garchon, Richa Agarwala, Alejandro A Schäffer, Fielding Hejtmancik.   

Abstract

Primary open-angle glaucoma (POAG) is characterized by damage to the optic nerve with associated loss of vision. Six named genetic loci have been identified as contributing to POAG susceptibility by genetic linkage analysis of mostly Caucasian families, and two of the six causative genes have been identified. The Barbados Family Study of Open-Angle Glaucoma (BFSG) was designed to evaluate the genetic component of POAG in a population of African descent. A genome-wide scan was performed on 1327 individuals from 146 families in Barbados, West Indies. Linkage results were based on models and parameter estimates derived from a segregation analysis of these families, and on model-free analyses. Two-point LOD scores >1.0 were identified on chromosomes 1, 2, 9, 10, 11, and 14, with increased multipoint LOD scores being found on chromosomes 2, 10, and 14. Fine mapping was subsequently carried out and indicated that POAG may be linked to intervals on chromosome 2q between D2S2188 and D2S2178 and chromosome 10p between D10S1477 and D10S601. Heterogeneity testing strongly supports linkage for glaucoma to at least one of these regions and suggests possible linkages to both. Although TIGR/myocilin and optineurin mutations have been shown to be causally linked to POAG in other populations, findings from this study do not support either of these as causative genes in an Afro-Caribbean population known to have relatively high rates of POAG.

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Year:  2003        PMID: 12616399     DOI: 10.1007/s00439-003-0910-z

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  37 in total

1.  Patterns of open-angle glaucoma in the Barbados Family Study.

Authors:  M C Leske; B Nemesure; Q He; S Y Wu; J Fielding Hejtmancik; A Hennis
Journal:  Ophthalmology       Date:  2001-06       Impact factor: 12.079

2.  GLC1F, a new primary open-angle glaucoma locus, maps to 7q35-q36.

Authors:  M K Wirtz; J R Samples; K Rust; J Lie; L Nordling; K Schilling; T S Acott; P L Kramer
Journal:  Arch Ophthalmol       Date:  1999-02

3.  A third locus (GLC1D) for adult-onset primary open-angle glaucoma maps to the 8q23 region.

Authors:  O C Trifan; E I Traboulsi; D Stoilova; I Alozie; R Nguyen; S Raja; M Sarfarazi
Journal:  Am J Ophthalmol       Date:  1998-07       Impact factor: 5.258

4.  Mutations in LMX1B cause abnormal skeletal patterning and renal dysplasia in nail patella syndrome.

Authors:  S D Dreyer; G Zhou; A Baldini; A Winterpacht; B Zabel; W Cole; R L Johnson; B Lee
Journal:  Nat Genet       Date:  1998-05       Impact factor: 38.330

5.  Racial variations in the prevalence of primary open-angle glaucoma. The Baltimore Eye Survey.

Authors:  J M Tielsch; A Sommer; J Katz; R M Royall; H A Quigley; J Javitt
Journal:  JAMA       Date:  1991-07-17       Impact factor: 56.272

6.  A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Authors:  C Dib; S Fauré; C Fizames; D Samson; N Drouot; A Vignal; P Millasseau; S Marc; J Hazan; E Seboun; M Lathrop; G Gyapay; J Morissette; J Weissenbach
Journal:  Nature       Date:  1996-03-14       Impact factor: 49.962

7.  A powerful likelihood method for the analysis of linkage disequilibrium between trait loci and one or more polymorphic marker loci.

Authors:  J D Terwilliger
Journal:  Am J Hum Genet       Date:  1995-03       Impact factor: 11.025

8.  Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Authors:  K W Broman; J C Murray; V C Sheffield; R L White; J L Weber
Journal:  Am J Hum Genet       Date:  1998-09       Impact factor: 11.025

9.  Localization of two genes for Usher syndrome type I to chromosome 11.

Authors:  R J Smith; E C Lee; W J Kimberling; S P Daiger; M Z Pelias; B J Keats; M Jay; A Bird; W Reardon; M Guest
Journal:  Genomics       Date:  1992-12       Impact factor: 5.736

10.  Loss-of-function mutations in the LIM-homeodomain gene, LMX1B, in nail-patella syndrome.

Authors:  D Vollrath; V L Jaramillo-Babb; M V Clough; I McIntosh; K M Scott; P R Lichter; J E Richards
Journal:  Hum Mol Genet       Date:  1998-07       Impact factor: 6.150

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  23 in total

1.  Evidence for a novel glaucoma locus at chromosome 3p21-22.

Authors:  Paul N Baird; Simon J Foote; David A Mackey; Jamie Craig; Terence P Speed; Alexandre Bureau
Journal:  Hum Genet       Date:  2005-05-20       Impact factor: 4.132

2.  Identification of novel genetic loci for intraocular pressure: a genomewide scan of the Beaver Dam Eye Study.

Authors:  Priya Duggal; Alison P Klein; Kristine E Lee; Ronald Klein; Barbara E K Klein; Joan E Bailey-Wilson
Journal:  Arch Ophthalmol       Date:  2007-01

3.  Defining the human macula transcriptome and candidate retinal disease genes using EyeSAGE.

Authors:  Catherine Bowes Rickman; Jessica N Ebright; Zachary J Zavodni; Ling Yu; Tianyuan Wang; Stephen P Daiger; Graeme Wistow; Kathy Boon; Michael A Hauser
Journal:  Invest Ophthalmol Vis Sci       Date:  2006-06       Impact factor: 4.799

4.  Inherited, familial and sporadic primary open-angle glaucoma.

Authors:  Gordon Gong; Sade Kosoko-Lasaki; Gleb Haynatzki; Henry T Lynch; Jane A Lynch; M Roy Wilson
Journal:  J Natl Med Assoc       Date:  2007-05       Impact factor: 1.798

5.  Evidence for RPGRIP1 gene as risk factor for primary open angle glaucoma.

Authors:  Lorena Fernández-Martínez; Stef Letteboer; Christian Y Mardin; Nicole Weisschuh; Eugen Gramer; Bernhard Hf Weber; Bernd Rautenstrauss; Paulo A Ferreira; Friedrich E Kruse; André Reis; Ronald Roepman; Francesca Pasutto
Journal:  Eur J Hum Genet       Date:  2011-01-12       Impact factor: 4.246

6.  The African Descent and Glaucoma Evaluation Study (ADAGES) III: Contribution of Genotype to Glaucoma Phenotype in African Americans: Study Design and Baseline Data.

Authors:  Linda M Zangwill; Radha Ayyagari; Jeffrey M Liebmann; Christopher A Girkin; Robert Feldman; Harvey Dubiner; Keri A Dirkes; Matthew Holmann; Eunice Williams-Steppe; Naama Hammel; Luke J Saunders; Suzanne Vega; Kevin Sandow; Kathryn Roll; Rigby Slight; Daniel Auerbach; Brian C Samuels; Joseph F Panarelli; John P Mitchell; Lama A Al-Aswad; Sung Chul Park; Celso Tello; Jeremy Cotliar; Rajendra Bansal; Paul A Sidoti; George A Cioffi; Dana Blumberg; Robert Ritch; Nicholas P Bell; Lauren S Blieden; Garvin Davis; Felipe A Medeiros; Maggie C Y Ng; Swapan K Das; Nicholette D Palmer; Jasmin Divers; Carl D Langefeld; Barry I Freedman; Donald W Bowden; Mark A Christopher; Yii-der I Chen; Xiuqing Guo; Kent D Taylor; Jerome I Rotter; Robert N Weinreb
Journal:  Ophthalmology       Date:  2018-02-01       Impact factor: 12.079

Review 7.  Glaucoma: genes, phenotypes, and new directions for therapy.

Authors:  Bao Jian Fan; Janey L Wiggs
Journal:  J Clin Invest       Date:  2010-09-01       Impact factor: 14.808

8.  Expansive marker analysis replicating the association of glaucoma susceptibility with human chromosome loci 1q43 and 10p12.31.

Authors:  Kyunglan Kim; Dong Won Heo; Sewon Kim; Jong-Sung Kim; Chang-sik Kim; Changwon Kang
Journal:  Eur J Hum Genet       Date:  2013-07-10       Impact factor: 4.246

9.  Evaluation of SPARC as a candidate gene of juvenile-onset primary open-angle glaucoma by mutation and copy number analyses.

Authors:  Li Jia Chen; Pancy O S Tam; Clement C Y Tham; Xiao Ying Liang; Sylvia W Y Chiang; Oscar Canlas; Robert Ritch; Douglas J Rhee; Chi Pui Pang
Journal:  Mol Vis       Date:  2010-10-08       Impact factor: 2.367

Review 10.  Molecular complexity of primary open angle glaucoma: current concepts.

Authors:  Kunal Ray; Suddhasil Mookherjee
Journal:  J Genet       Date:  2009-12       Impact factor: 1.166

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