Literature DB >> 12604779

Transcriptional analysis of the B cell germinal center reaction.

Ulf Klein1, Yuhai Tu, Gustavo A Stolovitzky, Jeffrey L Keller, Joseph Haddad, Vladan Miljkovic, Giorgio Cattoretti, Andrea Califano, Riccardo Dalla-Favera.   

Abstract

The germinal center (GC) reaction is crucial for T cell-dependent immune responses and is targeted by B cell lymphomagenesis. Here we analyzed the transcriptional changes that occur in B cells during GC transit (naive B cells --> centroblasts --> centrocytes --> memory B cells) by gene expression profiling. Naive B cells, characterized by the expression of cell cycle-inhibitory and antiapoptotic genes, become centroblasts by inducing an atypical proliferation program lacking c-Myc expression, switching to a proapoptotic program, and down-regulating cytokine, chemokine, and adhesion receptors. The transition from GC to memory cells is characterized by a return to a phenotype similar to that of naive cells except for an apoptotic program primed for both death and survival and for changes in the expression of cell surface receptors including IL-2 receptor beta. These results provide insights into the dynamics of the GC reaction and represent the basis for the analysis of B cell malignancies.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12604779      PMCID: PMC151393          DOI: 10.1073/pnas.0437996100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  54 in total

1.  Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning.

Authors:  Margaret A Shipp; Ken N Ross; Pablo Tamayo; Andrew P Weng; Jeffery L Kutok; Ricardo C T Aguiar; Michelle Gaasenbeek; Michael Angelo; Michael Reich; Geraldine S Pinkus; Tane S Ray; Margaret A Koval; Kim W Last; Andrew Norton; T Andrew Lister; Jill Mesirov; Donna S Neuberg; Eric S Lander; Jon C Aster; Todd R Golub
Journal:  Nat Med       Date:  2002-01       Impact factor: 53.440

Review 2.  Plasma cells: finding new light at the end of B cell development.

Authors:  K L Calame
Journal:  Nat Immunol       Date:  2001-12       Impact factor: 25.606

3.  Immunological memory: contribution of memory B cells expressing costimulatory molecules in the resting state.

Authors:  A Bar-Or; E M Oliveira; D E Anderson; J I Krieger; M Duddy; K C O'Connor; D A Hafler
Journal:  J Immunol       Date:  2001-11-15       Impact factor: 5.422

Review 4.  Signatures of the immune response.

Authors:  A L Shaffer; A Rosenwald; E M Hurt; J M Giltnane; L T Lam; O K Pickeral; L M Staudt
Journal:  Immunity       Date:  2001-09       Impact factor: 31.745

5.  CD40-CD40L independent Ig gene hypermutation suggests a second B cell diversification pathway in humans.

Authors:  S Weller; A Faili; C Garcia; M C Braun; F Le Deist F; G de Saint Basile G; O Hermine; A Fischer; C A Reynaud; J C Weill
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

6.  Drosophila myc regulates cellular growth during development.

Authors:  L A Johnston; D A Prober; B A Edgar; R N Eisenman; P Gallant
Journal:  Cell       Date:  1999-09-17       Impact factor: 41.582

7.  Gene expression profiling of B cell chronic lymphocytic leukemia reveals a homogeneous phenotype related to memory B cells.

Authors:  U Klein; Y Tu; G A Stolovitzky; M Mattioli; G Cattoretti; H Husson; A Freedman; G Inghirami; L Cro; L Baldini; A Neri; A Califano; R Dalla-Favera
Journal:  J Exp Med       Date:  2001-12-03       Impact factor: 14.307

8.  Development of Th1-type immune responses requires the type I cytokine receptor TCCR.

Authors:  Q Chen; N Ghilardi; H Wang; T Baker; M H Xie; A Gurney; I S Grewal; F J de Sauvage
Journal:  Nature       Date:  2000-10-19       Impact factor: 49.962

Review 9.  Translocations involving c-myc and c-myc function.

Authors:  L M Boxer; C V Dang
Journal:  Oncogene       Date:  2001-09-10       Impact factor: 9.867

10.  Relation of gene expression phenotype to immunoglobulin mutation genotype in B cell chronic lymphocytic leukemia.

Authors:  A Rosenwald; A A Alizadeh; G Widhopf; R Simon; R E Davis; X Yu; L Yang; O K Pickeral; L Z Rassenti; J Powell; D Botstein; J C Byrd; M R Grever; B D Cheson; N Chiorazzi; W H Wilson; T J Kipps; P O Brown; L M Staudt
Journal:  J Exp Med       Date:  2001-12-03       Impact factor: 14.307

View more
  165 in total

1.  Mcl-1 is essential for germinal center formation and B cell memory.

Authors:  Ingela Vikstrom; Sebastian Carotta; Katja Lüthje; Victor Peperzak; Philipp J Jost; Stefan Glaser; Meinrad Busslinger; Philippe Bouillet; Andreas Strasser; Stephen L Nutt; David M Tarlinton
Journal:  Science       Date:  2010-10-07       Impact factor: 47.728

2.  miR-125b and miR-155 contribute to BCL2 repression and proliferation in response to CD40 ligand (CD154) in human leukemic B-cells.

Authors:  Shaun Willimott; Simon D Wagner
Journal:  J Biol Chem       Date:  2011-12-02       Impact factor: 5.157

Review 3.  POK/ZBTB proteins: an emerging family of proteins that regulate lymphoid development and function.

Authors:  Sung-Uk Lee; Takahiro Maeda
Journal:  Immunol Rev       Date:  2012-05       Impact factor: 12.988

4.  MiDReG: a method of mining developmentally regulated genes using Boolean implications.

Authors:  Debashis Sahoo; Jun Seita; Deepta Bhattacharya; Matthew A Inlay; Irving L Weissman; Sylvia K Plevritis; David L Dill
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

5.  Cutting edge: Hierarchy of maturity of murine memory B cell subsets.

Authors:  Mary M Tomayko; Natalie C Steinel; Shannon M Anderson; Mark J Shlomchik
Journal:  J Immunol       Date:  2010-11-15       Impact factor: 5.422

6.  Specific NEMO mutations impair CD40-mediated c-Rel activation and B cell terminal differentiation.

Authors:  Ashish Jain; Chi A Ma; Eduardo Lopez-Granados; Gary Means; William Brady; Jordan S Orange; Shuying Liu; Steven Holland; Jonathan M J Derry
Journal:  J Clin Invest       Date:  2004-12       Impact factor: 14.808

Review 7.  The biology of human lymphoid malignancies revealed by gene expression profiling.

Authors:  Louis M Staudt; Sandeep Dave
Journal:  Adv Immunol       Date:  2005       Impact factor: 3.543

8.  Transcriptional profiling of antigen-dependent murine B cell differentiation and memory formation.

Authors:  Deepta Bhattacharya; Ming T Cheah; Christopher B Franco; Naoki Hosen; Christopher L Pin; William C Sha; Irving L Weissman
Journal:  J Immunol       Date:  2007-11-15       Impact factor: 5.422

9.  Systematic comparison of gene expression between murine memory and naive B cells demonstrates that memory B cells have unique signaling capabilities.

Authors:  Mary M Tomayko; Shannon M Anderson; Catherine E Brayton; Saheli Sadanand; Natalie C Steinel; Timothy W Behrens; Mark J Shlomchik
Journal:  J Immunol       Date:  2008-07-01       Impact factor: 5.422

10.  Apurinic/apyrimidinic endonuclease 2 regulates the expansion of germinal centers by protecting against activation-induced cytidine deaminase-independent DNA damage in B cells.

Authors:  Jeroen E J Guikema; Erin K Linehan; Nada Esa; Daisuke Tsuchimoto; Yusaku Nakabeppu; Robert T Woodland; Carol E Schrader
Journal:  J Immunol       Date:  2014-06-16       Impact factor: 5.422

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.