Literature DB >> 12601001

Light and X-ray scattering show decorin to be a dimer in solution.

Paul G Scott1, J Gunter Grossmann, Carole M Dodd, John K Sheehan, Paul N Bishop.   

Abstract

Decorin is a widely distributed member of the extracellular matrix small leucine-rich repeat glycoprotein/proteoglycan family. For investigation of its physical properties, decorin from two sources (young steer skin and a recombinant adenovirus) was used. The first sample was extracted into 7 m urea and purified, while the second was isolated from medium conditioned by 293A cells infected with adenovirus and purified without chaotropes. The only chemical differences detected between these materials were a slightly shorter glycosaminoglycan chain and the retention of the propeptide on the latter. Circular dichroism spectra of the two samples were virtually identical, showing a high proportion of beta-sheet and beta-turn and little alpha-helix. The protein cores were completely denatured in 2.25 m guanidine HCl (GdnHCl) but recovered their secondary structure on removal of chaotrope. Light scattering of material eluted from gel-filtration columns in Tris-buffered saline, pH 7.0, gave molecular mass values of 165 +/- 1 kDa and 84.6 +/- 4 kDa for intact decorin and the glycoprotein core produced by digestion with chondroitin ABC lyase, respectively. Intact recombinant prodecorin had a mass of 148 +/- 18 kDa. These values, which are double those estimated from SDS gel electrophoresis or from the known sequences and compositions, were halved in 2.5 m GdnHCl. Data from solution x-ray scattering of intact decorin and its core in Tris-buffered saline are consistent with a dimeric particle whose protein component has a radius of gyration of 31.6 +/- 0.4 A, a maximum diameter of 98 +/- 5 A, and approximates two intertwined C shapes.

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Year:  2003        PMID: 12601001     DOI: 10.1074/jbc.M211936200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Microfibrillar structure of type I collagen in situ.

Authors:  Joseph P R O Orgel; Thomas C Irving; Andrew Miller; Tim J Wess
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-02       Impact factor: 11.205

2.  Differential availability/processing of decorin precursor in arterial and venous smooth muscle cells.

Authors:  Rafaella Franch; Angela Chiavegato; Maddalena Maraschin; Serena Candeo; Simonetta Ausoni; Antonello Villa; Gino Gerosa; Lisa Gasparotto; Pierpaolo Parnigotto; Saverio Sartore
Journal:  J Anat       Date:  2006-09       Impact factor: 2.610

3.  Crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan.

Authors:  Paul G Scott; Paul A McEwan; Carole M Dodd; Ernst M Bergmann; Paul N Bishop; Jordi Bella
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-22       Impact factor: 11.205

Review 4.  Oncosuppressive roles of decorin through regulation of multiple receptors and diverse signaling pathways.

Authors:  Christopher Xie; Dipon K Mondal; Mikdat Ulas; Thomas Neill; Renato V Iozzo
Journal:  Am J Physiol Cell Physiol       Date:  2022-02-16       Impact factor: 4.249

5.  Proteoglycans and their heterogeneous glycosaminoglycans at the atomic scale.

Authors:  Benedict M Sattelle; Javad Shakeri; Matthew J Cliff; Andrew Almond
Journal:  Biomacromolecules       Date:  2015-02-16       Impact factor: 6.988

6.  Topological analysis of small leucine-rich repeat proteoglycan nyctalopin.

Authors:  Pasano Bojang; Ronald G Gregg
Journal:  PLoS One       Date:  2012-04-02       Impact factor: 3.240

Review 7.  Proteoglycan form and function: A comprehensive nomenclature of proteoglycans.

Authors:  Renato V Iozzo; Liliana Schaefer
Journal:  Matrix Biol       Date:  2015-02-18       Impact factor: 11.583

8.  Decorin core protein (decoron) shape complements collagen fibril surface structure and mediates its binding.

Authors:  Joseph P R O Orgel; Aya Eid; Olga Antipova; Jordi Bella; John E Scott
Journal:  PLoS One       Date:  2009-09-15       Impact factor: 3.240

9.  LRRCE: a leucine-rich repeat cysteine capping motif unique to the chordate lineage.

Authors:  Hosil Park; Julie Huxley-Jones; Ray P Boot-Handford; Paul N Bishop; Teresa K Attwood; Jordi Bella
Journal:  BMC Genomics       Date:  2008-12-12       Impact factor: 3.969

10.  The concave face of decorin mediates reversible dimerization and collagen binding.

Authors:  Mehwaesh Islam; Jayesh Gor; Stephen J Perkins; Yoshihiro Ishikawa; Hans Peter Bächinger; Erhard Hohenester
Journal:  J Biol Chem       Date:  2013-10-29       Impact factor: 5.157

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