Literature DB >> 12597277

Abundant poly(A)-bearing RNAs that lack open reading frames in Schizosaccharomyces pombe.

Takanori Watanabe1, Kazuyuki Miyashita, Takamune T Saito, Kentaro Nabeshima, Hiroshi Nojima.   

Abstract

We report here that 6.9% (68/987) of randomly selected cDNA clones from an S. pombe cDNA library lack apparently long open reading frames which we denote prl. One of them, prl1, was examined further because multiple bands were observed when it was used as a probe in northern blot analysis. These multiple bands appear to be derived from overlapping transcripts from both DNA strands, including non-coding RNAs and antisense RNAs in addition to mRNA. Such mechanisms may increase the transcriptional variation in S. pombe cells.

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Year:  2002        PMID: 12597277     DOI: 10.1093/dnares/9.6.209

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  11 in total

1.  Spo5/Mug12, a putative meiosis-specific RNA-binding protein, is essential for meiotic progression and forms Mei2 dot-like nuclear foci.

Authors:  Takashi Kasama; Akira Shigehisa; Aiko Hirata; Takamune T Saito; Takahiro Tougan; Daisuke Okuzaki; Hiroshi Nojima
Journal:  Eukaryot Cell       Date:  2006-08

2.  An RNA aptamer to HP1/Swi6 facilitates heterochromatin formation at an ectopic locus in S.pombe.

Authors:  Rita Rani; Abdul Mohd Yaseen; Akshay Malwade; Aarti Sevilimedu
Journal:  RNA Biol       Date:  2019-03-19       Impact factor: 4.652

3.  Mug28, a meiosis-specific protein of Schizosaccharomyces pombe, regulates spore wall formation.

Authors:  Akira Shigehisa; Daisuke Okuzaki; Takashi Kasama; Hideki Tohda; Aiko Hirata; Hiroshi Nojima
Journal:  Mol Biol Cell       Date:  2010-04-21       Impact factor: 4.138

4.  Global effects on gene expression in fission yeast by silencing and RNA interference machineries.

Authors:  Klavs R Hansen; Gavin Burns; Juan Mata; Thomas A Volpe; Robert A Martienssen; Jürg Bähler; Geneviève Thon
Journal:  Mol Cell Biol       Date:  2005-01       Impact factor: 4.272

5.  Sites of strong Rec12/Spo11 binding in the fission yeast genome are associated with meiotic recombination and with centromeres.

Authors:  Katja Ludin; Juan Mata; Stephen Watt; Elisabeth Lehmann; Jürg Bähler; Jürg Kohli
Journal:  Chromosoma       Date:  2008-05-01       Impact factor: 4.316

6.  Focused microarray analysis of peripheral mononuclear blood cells from Churg-Strauss syndrome patients.

Authors:  Takahiro Tougan; Hiroaki Onda; Daisuke Okuzaki; Shigeto Kobayashi; Hiroshi Hashimoto; Hiroshi Nojima
Journal:  DNA Res       Date:  2008-02-07       Impact factor: 4.458

7.  Meiosis specific coiled-coil proteins in Shizosaccharomyces pombe.

Authors:  Ayami Ohtaka; Takamune T Saito; Daisuke Okuzaki; Hiroshi Nojima
Journal:  Cell Div       Date:  2007-05-18       Impact factor: 5.130

8.  Detection of RNA structures in porcine EST data and related mammals.

Authors:  Stefan E Seemann; Michael J Gilchrist; Ivo L Hofacker; Peter F Stadler; Jan Gorodkin
Journal:  BMC Genomics       Date:  2007-09-10       Impact factor: 3.969

9.  Whole-genome microarrays of fission yeast: characteristics, accuracy, reproducibility, and processing of array data.

Authors:  Rachel Lyne; Gavin Burns; Juan Mata; Chris J Penkett; Gabriella Rustici; Dongrong Chen; Cordelia Langford; David Vetrie; Jürg Bähler
Journal:  BMC Genomics       Date:  2003-07-10       Impact factor: 3.969

10.  Meiotic recombination hotspots of fission yeast are directed to loci that express non-coding RNA.

Authors:  Wayne P Wahls; Eric R Siegel; Mari K Davidson
Journal:  PLoS One       Date:  2008-08-06       Impact factor: 3.240

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