Literature DB >> 12594945

Hierarchical interactions control CD4 gene expression during thymocyte development.

Matthew Adlam1, Gerald Siu.   

Abstract

CD4 gene regulation provides an ideal model for understanding the molecular events that drive T cell development. In this paper we use a transgenic approach to identify a CD4 LCR containing a stage-specific thymocyte enhancer (TE) and a region that protects against position effect variegation. Surprisingly, the TE acts indirectly through the previously defined proximal enhancer and is strongly induced upon commitment to the T cell lineage. We also describe a complex series of hierarchical control element interactions that orchestrate CD4 expression throughout thymopoiesis. These data provide a framework for understanding how CD4 gene expression is regulated in response to lineage commitment decisions.

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Year:  2003        PMID: 12594945     DOI: 10.1016/s1074-7613(03)00021-9

Source DB:  PubMed          Journal:  Immunity        ISSN: 1074-7613            Impact factor:   31.745


  21 in total

1.  H3K4 tri-methylation provides an epigenetic signature of active enhancers.

Authors:  Aleksandra Pekowska; Touati Benoukraf; Joaquin Zacarias-Cabeza; Mohamed Belhocine; Frederic Koch; Hélène Holota; Jean Imbert; Jean-Christophe Andrau; Pierre Ferrier; Salvatore Spicuglia
Journal:  EMBO J       Date:  2011-08-16       Impact factor: 11.598

Review 2.  CD4-CD8 differentiation in the thymus: connecting circuits and building memories.

Authors:  Yumei Xiong; Rémy Bosselut
Journal:  Curr Opin Immunol       Date:  2012-03-02       Impact factor: 7.486

3.  Epigenetic propagation of CD4 expression is established by the Cd4 proximal enhancer in helper T cells.

Authors:  Mark M W Chong; Natalie Simpson; Maria Ciofani; Grace Chen; Amélie Collins; Dan R Littman
Journal:  Genes Dev       Date:  2010-04-01       Impact factor: 11.361

4.  Molecular analysis of a locus control region in the T helper 2 cytokine gene cluster: a target for STAT6 but not GATA3.

Authors:  Dong U Lee; Anjana Rao
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-26       Impact factor: 11.205

5.  The role of the PI3K-AKT kinase pathway in T-cell development beyond the beta checkpoint.

Authors:  Ling Xue; Leslie Chiang; Chulho Kang; Astar Winoto
Journal:  Eur J Immunol       Date:  2008-11       Impact factor: 5.532

6.  Ectopic T cell receptor-α locus control region activity in B cells is suppressed by direct linkage to two flanking genes at once.

Authors:  Stefan Knirr; Janette Gomos-Klein; Blanca E Andino; Faith Harrow; Karl F Erhard; Damian Kovalovsky; Derek B Sant'Angelo; Benjamin D Ortiz
Journal:  PLoS One       Date:  2010-11-22       Impact factor: 3.240

7.  Coupling of the cell cycle and apoptotic machineries in developing T cells.

Authors:  Ling Xue; Yuefang Sun; Leslie Chiang; Bo He; Chulho Kang; Hector Nolla; Astar Winoto
Journal:  J Biol Chem       Date:  2010-01-12       Impact factor: 5.157

8.  Premalignant PTEN-deficient thymocytes activate microRNAs miR-146a and miR-146b as a cellular defense against malignant transformation.

Authors:  Megan L Burger; Ling Xue; Yuefang Sun; Chulho Kang; Astar Winoto
Journal:  Blood       Date:  2014-04-15       Impact factor: 22.113

9.  Genomewide computational analysis of nitrate response elements in rice and Arabidopsis.

Authors:  Suman K Das; Ravi Ramesh Pathak; Devapriya Choudhury; Nandula Raghuram
Journal:  Mol Genet Genomics       Date:  2007-08-07       Impact factor: 3.291

10.  Complete TCR-α gene locus control region activity in T cells derived in vitro from embryonic stem cells.

Authors:  Armin Lahiji; Martina Kucerová-Levisohn; Jordana Lovett; Roxanne Holmes; Juan Carlos Zúñiga-Pflücker; Benjamin D Ortiz
Journal:  J Immunol       Date:  2013-05-29       Impact factor: 5.422

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