Literature DB >> 12590177

Noncoding RNA transcripts.

Maciej Szymański1, Mirosława Z Barciszewska, Marek Zywicki, Jan Barciszewski.   

Abstract

Recent analyses of the human genome and available data about the other higher eukaryotic genomes have revealed that, in contrast to Eubacteria and Archaea, only a small fraction of the genetic material (ca 1.5%) codes for proteins. Most of genomic DNA and its RNA transcripts are involved in regulation of gene expression, which can be exerted at either the transcriptional level, controlling whether a gene is transcribed and to what extent, or at the post-translational level, regulating the fate of the transcribed RNA molecules, including their stability, efficiency of their translation and subcellular localization. Noncoding RNA genes produce functional RNA molecules (ncRNAs) rather than encoding proteins. These stable RNAs act by multiple mechanisms such as RNA-RNA base pairing, RNA-protein interactions and intrinsic RNA activity, as well as regulate diverse cellular functions, including RNA processing, mRNA stability, translation, protein stability and secretion. Non-protein-coding RNAs are known to play significant roles. Along with transfer RNAs, ribosomal RNAs and mRNAs, ncRNAs contribute to gene splicing, nucleotide modification, protein transport and regulation of gene expression.

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Year:  2003        PMID: 12590177

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   3.240


  22 in total

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Journal:  Drug Discov Today       Date:  2011-09-16       Impact factor: 7.851

2.  Protein-protein and protein-RNA contacts both contribute to the 15.5K-mediated assembly of the U4/U6 snRNP and the box C/D snoRNPs.

Authors:  Annemarie Schultz; Stephanie Nottrott; Nicholas James Watkins; Reinhard Lührmann
Journal:  Mol Cell Biol       Date:  2006-07       Impact factor: 4.272

3.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

4.  A novel noncoding RNA processed by Drosha is restricted to nucleus in mouse.

Authors:  Gayatri Ganesan; Satyanarayana M R Rao
Journal:  RNA       Date:  2008-05-30       Impact factor: 4.942

5.  Approaches to Fungal Genome Annotation.

Authors:  Brian J Haas; Qiandong Zeng; Matthew D Pearson; Christina A Cuomo; Jennifer R Wortman
Journal:  Mycology       Date:  2011-10-03

Review 6.  Warburg meets non-coding RNAs: the emerging role of ncRNA in regulating the glucose metabolism of cancer cells.

Authors:  Chenxiao Yu; Jiao Xue; Wei Zhu; Yang Jiao; Shuyu Zhang; Jianping Cao
Journal:  Tumour Biol       Date:  2014-11-28

7.  CM156, a sigma receptor ligand, reverses cocaine-induced place conditioning and transcriptional responses in the brain.

Authors:  Yan-Tong Xu; Matthew J Robson; Wioletta Szeszel-Fedorowicz; Divyen Patel; Robert Rooney; Christopher R McCurdy; Rae R Matsumoto
Journal:  Pharmacol Biochem Behav       Date:  2011-12-30       Impact factor: 3.533

8.  TurboFold: iterative probabilistic estimation of secondary structures for multiple RNA sequences.

Authors:  Arif O Harmanci; Gaurav Sharma; David H Mathews
Journal:  BMC Bioinformatics       Date:  2011-04-20       Impact factor: 3.169

9.  De novo computational prediction of non-coding RNA genes in prokaryotic genomes.

Authors:  Thao T Tran; Fengfeng Zhou; Sarah Marshburn; Mark Stead; Sidney R Kushner; Ying Xu
Journal:  Bioinformatics       Date:  2009-09-10       Impact factor: 6.937

10.  Expression and functional studies on the noncoding RNA, PRINS.

Authors:  Krisztina Szegedi; Anikó Göblös; Sarolta Bacsa; Mária Antal; István Balázs Németh; Zsuzsanna Bata-Csörgő; Lajos Kemény; Attila Dobozy; Márta Széll
Journal:  Int J Mol Sci       Date:  2012-12-21       Impact factor: 5.923

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