Literature DB >> 12589549

Saturation of two chromosome regions conferring resistance to SCMV with SSR and AFLP markers by targeted BSA.

C M Dussle1, M Quint, A E Melchinger, M L Xu, T Lübberstedt.   

Abstract

Quantitative trait loci (QTLs) and bulked segregant analyses (BSA) identified the major genes Scmv1 on chromosome 6 and Scmv2 on chromosome 3, conferring resistance against sugarcane mosaic virus (SCMV) in maize. Both chromosome regions were further enriched for SSR and AFLP markers by targeted bulked segregant analysis (tBSA) in order to identify and map only markers closely linked to either Scmv1 or Scmv2. For identification of markers closely linked to the target genes, symptomless individuals of advanced backcross generations BC5 to BC9 were employed. All AFLP markers, identified by tBSA using 400 EcoRI/ MseI primer combinations, mapped within both targeted marker intervals. Fourteen SSR and six AFLP markers mapped to the Scmv1 region. Eleven SSR and 18 AFLP markers were located in the Scmv2 region. Whereas the linear order of SSR markers and the window size for the Scmv2 region fitted well with publicly available genetic maps, map distances and window size differed substantially for the Scmv1 region on chromosome 6. A possible explanation for the observed discrepancies is the presence of two closely linked resistance genes in the Scmv1 region.

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Year:  2002        PMID: 12589549     DOI: 10.1007/s00122-002-1107-x

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  11 in total

1.  Genetic and physical fine mapping of Scmv2, a potyvirus resistance gene in maize.

Authors:  Christina Roenn Ingvardsen; Yongzhong Xing; Ursula Karoline Frei; Thomas Lübberstedt
Journal:  Theor Appl Genet       Date:  2010-02-14       Impact factor: 5.699

2.  Identification by suppression subtractive hybridization of genes that are differentially expressed between near-isogenic maize lines in association with sugarcane mosaic virus resistance.

Authors:  Chun Shi; Christina Ingvardsen; Fritz Thümmler; Albrecht E Melchinger; Gerhard Wenzel; Thomas Lübberstedt
Journal:  Mol Genet Genomics       Date:  2005-05-13       Impact factor: 3.291

3.  Molecular cloning and characterization of two pathogenesis-related β-1,3-glucanase genes ScGluA1 and ScGluD1 from sugarcane infected by Sporisorium scitamineum.

Authors:  Ya-chun Su; Li-ping Xu; Ban-tong Xue; Qi-bin Wu; Jin-long Guo; Lu-guang Wu; You-xiong Que
Journal:  Plant Cell Rep       Date:  2013-07-11       Impact factor: 4.570

4.  High-resolution genetic mapping at the Bph15 locus for brown planthopper resistance in rice (Oryza sativa L.).

Authors:  Haiyuan Yang; Aiqing You; Zhifan Yang; Futie Zhang; Ruifeng He; Lili Zhu; Guangcun He
Journal:  Theor Appl Genet       Date:  2004-11-10       Impact factor: 5.699

5.  Responses of maize (Zea mays L.) near isogenic lines carrying Wsm1, Wsm2, and Wsm3 to three viruses in the Potyviridae.

Authors:  Mark W Jones; Emily C Boyd; Margaret G Redinbaugh
Journal:  Theor Appl Genet       Date:  2011-06-12       Impact factor: 5.574

6.  Characterization of Sugarcane Mosaic Virus Scmv1 and Scmv2 Resistance Regions by Regional Association Analysis in Maize.

Authors:  Pengfei Leng; Qing Ji; Yongfu Tao; Rania Ibrahim; Guangtang Pan; Mingliang Xu; Thomas Lübberstedt
Journal:  PLoS One       Date:  2015-10-21       Impact factor: 3.240

7.  Isolation of a novel peroxisomal catalase gene from sugarcane, which is responsive to biotic and abiotic stresses.

Authors:  Yachun Su; Jinlong Guo; Hui Ling; Shanshan Chen; Shanshan Wang; Liping Xu; Andrew C Allan; Youxiong Que
Journal:  PLoS One       Date:  2014-01-02       Impact factor: 3.240

8.  Bulk segregant RNA-seq reveals expression and positional candidate genes and allele-specific expression for disease resistance against enteric septicemia of catfish.

Authors:  Ruijia Wang; Luyang Sun; Lisui Bao; Jiaren Zhang; Yanliang Jiang; Jun Yao; Lin Song; Jianbin Feng; Shikai Liu; Zhanjiang Liu
Journal:  BMC Genomics       Date:  2013-12-30       Impact factor: 3.969

9.  Combined linkage and association mapping reveals candidates for Scmv1, a major locus involved in resistance to sugarcane mosaic virus (SCMV) in maize.

Authors:  Yongfu Tao; Lu Jiang; Qingqing Liu; Yan Zhang; Rui Zhang; Christina Roenn Ingvardsen; Ursula Karoline Frei; Baobao Wang; Jinsheng Lai; Thomas Lübberstedt; Mingliang Xu
Journal:  BMC Plant Biol       Date:  2013-10-18       Impact factor: 4.215

10.  Assessment of Functional EST-SSR Markers (Sugarcane) in Cross-Species Transferability, Genetic Diversity among Poaceae Plants, and Bulk Segregation Analysis.

Authors:  Shamshad Ul Haq; Pradeep Kumar; R K Singh; Kumar Sambhav Verma; Ritika Bhatt; Meenakshi Sharma; Sumita Kachhwaha; S L Kothari
Journal:  Genet Res Int       Date:  2016-06-01
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