Literature DB >> 12586695

Large-scale functional genomic analysis of sporulation and meiosis in Saccharomyces cerevisiae.

Akon H Enyenihi1, William S Saunders.   

Abstract

We have used a single-gene deletion mutant bank to identify the genes required for meiosis and sporulation among 4323 nonessential Saccharomyces cerevisiae annotated open reading frames (ORFs). Three hundred thirty-four sporulation-essential genes were identified, including 78 novel ORFs and 115 known genes without previously described sporulation defects in the comprehensive Saccharomyces Genome (SGD) or Yeast Proteome (YPD) phenotype databases. We have further divided the uncharacterized sporulation-essential genes into early, middle, and late stages of meiosis according to their requirement for IME1 induction and nuclear division. We believe this represents a nearly complete identification of the genes uniquely required for this complex cellular pathway. The set of genes identified in this phenotypic screen shows only limited overlap with those identified by expression-based studies.

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Year:  2003        PMID: 12586695      PMCID: PMC1462418     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  30 in total

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Authors:  K Jiao; S A Bullard; L Salem; R E Malone
Journal:  Genetics       Date:  1999-05       Impact factor: 4.562

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Authors:  Peter Briza; Edith Bogengruber; Albert Thür; Michael Rützler; Martin Münsterkötter; Ian W Dawes; Michael Breitenbach
Journal:  Yeast       Date:  2002-03-30       Impact factor: 3.239

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Journal:  Nat Genet       Date:  2000-12       Impact factor: 38.330

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Journal:  Mol Gen Genet       Date:  1974

5.  Genes controlling meiosis and spore formation in yeast.

Authors:  M S Esposito; R E Esposito
Journal:  Genetics       Date:  1974-09       Impact factor: 4.562

6.  The role of the SPO11 gene in meiotic recombination in yeast.

Authors:  S Klapholz; C S Waddell; R E Esposito
Journal:  Genetics       Date:  1985-06       Impact factor: 4.562

7.  Functional profiling of the Saccharomyces cerevisiae genome.

Authors:  Guri Giaever; Angela M Chu; Li Ni; Carla Connelly; Linda Riles; Steeve Véronneau; Sally Dow; Ankuta Lucau-Danila; Keith Anderson; Bruno André; Adam P Arkin; Anna Astromoff; Mohamed El-Bakkoury; Rhonda Bangham; Rocio Benito; Sophie Brachat; Stefano Campanaro; Matt Curtiss; Karen Davis; Adam Deutschbauer; Karl-Dieter Entian; Patrick Flaherty; Francoise Foury; David J Garfinkel; Mark Gerstein; Deanna Gotte; Ulrich Güldener; Johannes H Hegemann; Svenja Hempel; Zelek Herman; Daniel F Jaramillo; Diane E Kelly; Steven L Kelly; Peter Kötter; Darlene LaBonte; David C Lamb; Ning Lan; Hong Liang; Hong Liao; Lucy Liu; Chuanyun Luo; Marc Lussier; Rong Mao; Patrice Menard; Siew Loon Ooi; Jose L Revuelta; Christopher J Roberts; Matthias Rose; Petra Ross-Macdonald; Bart Scherens; Greg Schimmack; Brenda Shafer; Daniel D Shoemaker; Sharon Sookhai-Mahadeo; Reginald K Storms; Jeffrey N Strathern; Giorgio Valle; Marleen Voet; Guido Volckaert; Ching-yun Wang; Teresa R Ward; Julie Wilhelmy; Elizabeth A Winzeler; Yonghong Yang; Grace Yen; Elaine Youngman; Kexin Yu; Howard Bussey; Jef D Boeke; Michael Snyder; Peter Philippsen; Ronald W Davis; Mark Johnston
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

8.  Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters.

Authors:  Lani F Wu; Timothy R Hughes; Armaity P Davierwala; Mark D Robinson; Roland Stoughton; Steven J Altschuler
Journal:  Nat Genet       Date:  2002-06-24       Impact factor: 38.330

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Journal:  J Cell Biol       Date:  1970-03       Impact factor: 10.539

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Authors:  P B Moens; E Rapport
Journal:  J Cell Biol       Date:  1971-08       Impact factor: 10.539

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  117 in total

Review 1.  'Conserved hypothetical' proteins: prioritization of targets for experimental study.

Authors:  Michael Y Galperin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2004-10-12       Impact factor: 16.971

2.  New role for ceramide in the pheromone response.

Authors:  Nabil Matmati; Hiroshi Kitagaki; Yusuf A Hannun
Journal:  Cell Cycle       Date:  2016       Impact factor: 4.534

3.  SSP2 and OSW1, two sporulation-specific genes involved in spore morphogenesis in Saccharomyces cerevisiae.

Authors:  Jing Li; Seema Agarwal; G Shirleen Roeder
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

Review 4.  Ascospore formation in the yeast Saccharomyces cerevisiae.

Authors:  Aaron M Neiman
Journal:  Microbiol Mol Biol Rev       Date:  2005-12       Impact factor: 11.056

5.  A genomic screen for yeast vacuolar membrane ATPase mutants.

Authors:  Maria Sambade; Mercedes Alba; Anne M Smardon; Robert W West; Patricia M Kane
Journal:  Genetics       Date:  2005-06-03       Impact factor: 4.562

6.  Characterization of regulatory non-catalytic hexokinases in Aspergillus nidulans.

Authors:  Stella M H Bernardo; Karen-Ann Gray; Richard B Todd; Brian F Cheetham; Margaret E Katz
Journal:  Mol Genet Genomics       Date:  2007-01-17       Impact factor: 3.291

7.  GermOnline, a cross-species community knowledgebase on germ cell differentiation.

Authors:  C Wiederkehr; R Basavaraj; C Sarrauste de Menthière; L Hermida; R Koch; U Schlecht; A Amon; S Brachat; M Breitenbach; P Briza; S Caburet; M Cherry; R Davis; A Deutschbauer; H G Dickinson; T Dumitrescu; M Fellous; A Goldman; J A Grootegoed; R Hawley; R Ishii; B Jégou; R J Kaufman; F Klein; N Lamb; B Maro; K Nasmyth; A Nicolas; T Orr-Weaver; P Philippsen; C Pineau; K P Rabitsch; V Reinke; H Roest; W Saunders; M Schröder; T Schedl; M Siep; A Villeneuve; D J Wolgemuth; M Yamamoto; D Zickler; R E Esposito; M Primig
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

8.  Functional specificity among ribosomal proteins regulates gene expression.

Authors:  Suzanne Komili; Natalie G Farny; Frederick P Roth; Pamela A Silver
Journal:  Cell       Date:  2007-11-02       Impact factor: 41.582

9.  The Ama1-directed anaphase-promoting complex regulates the Smk1 mitogen-activated protein kinase during meiosis in yeast.

Authors:  Christine M McDonald; Katrina F Cooper; Edward Winter
Journal:  Genetics       Date:  2005-08-03       Impact factor: 4.562

10.  Structure-system correlation identifies a gene regulatory Mediator submodule.

Authors:  Laurent Larivière; Martin Seizl; Sake van Wageningen; Susanne Röther; Loes van de Pasch; Heidi Feldmann; Katja Strässer; Steve Hahn; Frank C P Holstege; Patrick Cramer
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

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