Literature DB >> 12586391

Single-strand-specific nucleases.

Neelam A Desai1, Vepatu Shankar.   

Abstract

Single-strand-specific nucleases are multifunctional enzymes and widespread in distribution. Their ability to act selectively on single-stranded nucleic acids and single-stranded regions in double-stranded nucleic acids has led to their extensive application as probes for the structural determination of nucleic acids. Intracellularly, they have been implicated in recombination, repair and replication, whereas extracellular enzymes have a role in nutrition. Although more than 30 single-strand-specific nucleases from various sources have been isolated till now, only a few enzymes (S1 nuclease from Aspergillus oryzae, P1 nuclease from Penicillium citrinum and nucleases from Alteromonas espejiana, Neurospora crassa, Ustilago maydis and mung bean) have been characterized to a significant extent. Recently, some of these enzymes have been cloned, their crystal structures solved and their interactions with different substrates have been established. The detection, purification, characteristics, structure-function correlations, biological role and applications of single-strand-specific nucleases are reviewed.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12586391     DOI: 10.1111/j.1574-6976.2003.tb00626.x

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  50 in total

1.  Mismatch cleavage by single-strand specific nucleases.

Authors:  Bradley J Till; Chris Burtner; Luca Comai; Steven Henikoff
Journal:  Nucleic Acids Res       Date:  2004-05-11       Impact factor: 16.971

2.  Straightforward detection of SNPs in double-stranded DNA by using exonuclease III/nuclease S1/PNA system.

Authors:  Binzhi Ren; Jing-Min Zhou; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2004-02-24       Impact factor: 16.971

3.  Diversity and metabolism of marine bacteria cultivated on dissolved DNA.

Authors:  Jay T Lennon
Journal:  Appl Environ Microbiol       Date:  2007-03-02       Impact factor: 4.792

4.  Bax1 is a novel endonuclease: implications for archaeal nucleotide excision repair.

Authors:  Heide M Roth; Ingrid Tessmer; Bennett Van Houten; Caroline Kisker
Journal:  J Biol Chem       Date:  2009-09-15       Impact factor: 5.157

5.  Protein switches identified from diverse insertion libraries created using S1 nuclease digestion of supercoiled-form plasmid DNA.

Authors:  Jennifer Tullman; Gurkan Guntas; Matthew Dumont; Marc Ostermeier
Journal:  Biotechnol Bioeng       Date:  2011-06-15       Impact factor: 4.530

6.  A short double-stranded RNA motif of Peach latent mosaic viroid contains the initiation and the self-cleavage sites of both polarity strands.

Authors:  Sonia Delgado; Angel E Martínez de Alba; Carmen Hernández; Ricardo Flores
Journal:  J Virol       Date:  2005-10       Impact factor: 5.103

7.  Structure-based functional identification of Helicobacter pylori HP0268 as a nuclease with both DNA nicking and RNase activities.

Authors:  Ki-Young Lee; Kyu-Yeon Lee; Ji-Hun Kim; In-Gyun Lee; Sung-Hee Lee; Dae-Won Sim; Hyung-Sik Won; Bong-Jin Lee
Journal:  Nucleic Acids Res       Date:  2015-04-27       Impact factor: 16.971

8.  The transcription initiation sites of eggplant latent viroid strands map within distinct motifs in their in vivo RNA conformations.

Authors:  Amparo López-Carrasco; Selma Gago-Zachert; Giuseppe Mileti; Sofia Minoia; Ricardo Flores; Sonia Delgado
Journal:  RNA Biol       Date:  2016       Impact factor: 4.652

9.  Improvement of RNA secondary structure prediction using RNase H cleavage and randomized oligonucleotides.

Authors:  Andrew D Kauffmann; Ryan J Campagna; Chantal B Bartels; Jessica L Childs-Disney
Journal:  Nucleic Acids Res       Date:  2009-07-13       Impact factor: 16.971

10.  Structural and dynamic characterization of the upper part of the HIV-1 cTAR DNA hairpin.

Authors:  Loussiné Zargarian; Igor Kanevsky; Ali Bazzi; Jonathan Boynard; Françoise Chaminade; Philippe Fossé; Olivier Mauffret
Journal:  Nucleic Acids Res       Date:  2009-05-05       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.