Literature DB >> 12584703

Stabilities and isomeric equilibria in aqueous solution of monomeric metal ion complexes of adenosine 5'-diphosphate (ADP3-) in comparison with those of adenosine 5'-monophosphate (AMP2-).

Emanuela M Bianchi1, S Ali A Sajadi, Bin Song, Helmut Sigel.   

Abstract

Under experimental conditions in which the self-association of the adenine phosphates (AP), that is, of adenosine 5'-monophosphate (AMP(2-)) and adenosine 5'-diphosphate (ADP(3-)), is negligible, potentiometric pH titrations were carried out to determine the stabilities of the M(H;AP) and M(AP) complexes where M(2+)=Mg(2+), Ca(2+), Sr(2+), Ba(2+), Mn(2+), Co(2+), Ni(2+), Cu(2+), Zn(2+), or Cd(2+) (25 degrees C; I=0.1 M, NaNO(3)). It is concluded that in the M(H;AMP)(+) species M(2+) is bound at the adenine moiety and in the M(H;ADP) complexes at the diphosphate unit; however, the proton resides in both types of monoprotonated complexes at the phosphate residue. The stabilities of nearly all the M(AMP) and M(ADP)(-) complexes are significantly larger than what is expected for a sole coordination of M(2+) to the phosphate residue. This increased complex stability is attributed, in agreement with previous (1)H NMR shift studies and further information existing in the literature, to the formation of macrochelates of the phosphate-coordinated metal ions with N7 of the adenine residues. On the basis of recent measurements with simple phosphate monoesters and phosphonate ligands (R-MP(2-)) as well as with diphosphate monoesters (R-DP(3-)), where R is a noncoordinating and noninhibiting residue, the increased stabilities of the M(AMP) and M(ADP)(-) complexes due to the M(2+)-N7 interaction could be evaluated and the extent of macrochelate formation calculated. The results show that the formation degrees of the macrochelates for the complexes of the alkaline earth ions are small (about 15 % at the most), whereas for the 3d metal ions as well as for Zn(2+) and Cd(2+) the formation degrees vary between about 15 % (Mn(2+)) and 75 % (Ni(2+)) with values of about 40 and 50 % for Zn(2+) and Cu(2+), respectively. It is interesting to note, taking earlier results for M(ATP)(2-) complexes also into account (ATP(4-)=adenosine 5'-triphosphate), that for a given metal ion in nearly all instances the formation degrees of the macrochelates are within the error limits the same for M(AMP), M(ADP)(-) and M(ATP)(2-) complexes; except for Co(2+) and Ni(2+) it holds M(AMP) > M(ADP)(-) approximately M(ATP)(2-). This result is astonishing if one considers that the absolute stability constants of these complexes, which are determined largely by the affinity of the phosphate residues, can differ by more than two orders of magnitude. The impact and conclusions of these observations for biological systems are shortly lined out.

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Year:  2003        PMID: 12584703     DOI: 10.1002/chem.200390109

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  7 in total

1.  A quantitative Raman spectroscopic signal for metal-phosphodiester interactions in solution.

Authors:  Eric L Christian; Vernon E Anderson; Paul R Carey; Michael E Harris
Journal:  Biochemistry       Date:  2010-04-06       Impact factor: 3.162

2.  Quantification of isomeric equilibria formed by metal ion complexes of 8-[2-(phosphonomethoxy)ethyl]-8-azaadenine (8,8aPMEA) and 9-[2-(phosphonomethoxy)ethyl]-8-azaadenine (9,8aPMEA). Derivatives of the antiviral nucleotide analogue 9-[2-(phosphonomethoxy)ethyl]adenine (PMEA).

Authors:  Raquel B Gómez-Coca; Larisa E Kapinos; Antonín Holý; Rosario A Vilaplana; Francisco González-Vílchez; Helmut Sigel
Journal:  J Biol Inorg Chem       Date:  2004-10-20       Impact factor: 3.358

Review 3.  Coordination Chemistry of Nucleotides and Antivirally Active Acyclic Nucleoside Phosphonates, including Mechanistic Considerations.

Authors:  Astrid Sigel; Helmut Sigel; Roland K O Sigel
Journal:  Molecules       Date:  2022-04-19       Impact factor: 4.927

4.  A quantitative appraisal of the ambivalent metal ion binding properties of cytidine in aqueous solution and an estimation of the anti-syn energy barrier of cytidine derivatives.

Authors:  Bernd Knobloch; Helmut Sigel
Journal:  J Biol Inorg Chem       Date:  2004-03-19       Impact factor: 3.358

5.  Tipiracil binds to uridine site and inhibits Nsp15 endoribonuclease NendoU from SARS-CoV-2.

Authors:  Youngchang Kim; Jacek Wower; Natalia Maltseva; Changsoo Chang; Robert Jedrzejczak; Mateusz Wilamowski; Soowon Kang; Vlad Nicolaescu; Glenn Randall; Karolina Michalska; Andrzej Joachimiak
Journal:  Commun Biol       Date:  2021-02-09

6.  Characterization of copper(II) interactions with sinefungin, a nucleoside antibiotic: combined potentiometric, spectroscopic and DFT studies.

Authors:  Maria Jaworska; Piotr Lodowski; Ariel Mucha; Wojciech Szczepanik; Gianni Valensin; Massimo Cappannelli; Małgorzata Jezowska-Bojczuk
Journal:  Bioinorg Chem Appl       Date:  2007       Impact factor: 7.778

7.  Thermodynamics of binding of divalent magnesium and manganese to uridine phosphates: implications for diabetes-related hypomagnesaemia and carbohydrate biocatalysis.

Authors:  Corbin J Zea; Gulden Camci-Unal; Nicola L Pohl
Journal:  Chem Cent J       Date:  2008-07-15       Impact factor: 4.215

  7 in total

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