Literature DB >> 12584139

GSCope: a clipped fisheye viewer effective for highly complicated biomolecular network graphs.

Tetsuro Toyoda1, Yoshiki Mochizuki, Akihiko Konagaya.   

Abstract

UNLABELLED: A graphical tool to visualize highly complicated biomolecular network graphs is described. It helps us to understand the graphs from macroscopic and microscopic viewpoints by incorporating continuous transition from global to clipped hyperbolic projection. GSCope also helps us to find a molecule in the graphs by offering several searching functions. It is useful to publish biomolecular network graphs on the internet. AVAILABILITY: GSCope is available at http://gscope.gsc.riken.go.jp.

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Year:  2003        PMID: 12584139     DOI: 10.1093/bioinformatics/btg001

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  3 in total

1.  RuleBender: integrated modeling, simulation and visualization for rule-based intracellular biochemistry.

Authors:  Adam M Smith; Wen Xu; Yao Sun; James R Faeder; G Elisabeta Marai
Journal:  BMC Bioinformatics       Date:  2012-05-18       Impact factor: 3.169

2.  Multi-membership gene regulation in pathway based microarray analysis.

Authors:  Stelios P Pavlidis; Annette M Payne; Stephen M Swift
Journal:  Algorithms Mol Biol       Date:  2011-09-22       Impact factor: 1.405

3.  A survey of visualization tools for biological network analysis.

Authors:  Georgios A Pavlopoulos; Anna-Lynn Wegener; Reinhard Schneider
Journal:  BioData Min       Date:  2008-11-28       Impact factor: 2.522

  3 in total

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