Literature DB >> 12583720

Soils of the Chinese Hubei province show a very high diversity of Sinorhizobium fredii strains.

M Camacho1, C Santamaría, F Temprano, D N Rodríguez-Navarro, A Daza, R Espuny, R Bellogín, F J Ollero, M C C P Lyra de, A Buendía-Clavería, J Zhou, F D Li, C Mateos, E Velázquez, J M Vinardell, J E Ruiz-Sainz.   

Abstract

Biodiversity studies of native soybean-nodulating rhizobia in soils from the Chinese Hubei province (Honghu county; pH 8, alluvial soil) have been carried out. Inoculation of an American (Williams) and an Asiatic (Peking) soybean cultivar with eleven soil samples led to the isolation of 167 rhizobia strains. The ratio (%) of slow-/fast-growing isolates was different depending on the trap plant used. All isolates were able to nodulate both cultivars, although the N2-fixation efficiency (measured as plant-top dry weight) was different among them. A total of thirty-three isolates were selected for further characterisation on the basis of physiological parameters, PCR-RFLP of symbiotic genes and Low Molecular Weight RNA, lipopolysaccharide, protein and plasmid profiles. Low Molecular Weight RNA profiling indicates that all the isolates belong to species Sinorhizobium fredii. The dendrogram obtained with the physiological parameters has been useful to classify the isolates at strain level, although plasmid profiling was the most discriminating technique to detect differences among the analysed soybean-rhizobia isolates, showing there is not two isolates identical each other. Plasmid profile analyses also revealed that some of the investigated strains contain low molecular weight plasmids (7-8-kb). They are, to our knowledge, the smallest ever found in rhizobia and they could be the starting point for the construction of the first group of vectors based on a native rhizobia replicon.

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Year:  2002        PMID: 12583720     DOI: 10.1078/07232020260517733

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  8 in total

1.  Comparative genomics of rhizobia nodulating soybean suggests extensive recruitment of lineage-specific genes in adaptations.

Authors:  Chang Fu Tian; Yuan Jie Zhou; Yan Ming Zhang; Qin Qin Li; Yun Zeng Zhang; Dong Fang Li; Shuang Wang; Jun Wang; Luz B Gilbert; Ying Rui Li; Wen Xin Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-14       Impact factor: 11.205

2.  Diversity and biogeography of rhizobia isolated from root nodules of Glycine max grown in Hebei Province, China.

Authors:  Qin Qin Li; En Tao Wang; Yun Zeng Zhang; Yan Ming Zhang; Chang Fu Tian; Xin Hua Sui; Wen Feng Chen; Wen Xin Chen
Journal:  Microb Ecol       Date:  2011-02-22       Impact factor: 4.552

3.  Replicon-dependent differentiation of symbiosis-related genes in Sinorhizobium strains nodulating Glycine max.

Authors:  Hui Juan Guo; En Tao Wang; Xing Xing Zhang; Qin Qin Li; Yan Ming Zhang; Chang Fu Tian; Wen Xin Chen
Journal:  Appl Environ Microbiol       Date:  2013-12-06       Impact factor: 4.792

4.  Biodiversity and biogeography of rhizobia associated with soybean plants grown in the North China Plain.

Authors:  Yan Ming Zhang; Ying Li; Wen Feng Chen; En Tao Wang; Chang Fu Tian; Qin Qin Li; Yun Zeng Zhang; Xin Hua Sui; Wen Xin Chen
Journal:  Appl Environ Microbiol       Date:  2011-07-22       Impact factor: 4.792

5.  Bradyrhizobium spp. and Sinorhizobium fredii are predominant in root nodules of Vigna angularis, a native legume crop in the subtropical region of China.

Authors:  Li Li Han; En Tao Wang; Yang Li Lu; Yong Fa Zhang; Xin Hua Sui; Wen Feng Chen; Wen Xin Chen
Journal:  J Microbiol       Date:  2009-06-26       Impact factor: 3.422

6.  Genetic Characterization of Soybean Rhizobia Isolated from Different Ecological Zones in North-Eastern Afghanistan.

Authors:  Safiullah Habibi; Abdul Ghani Ayubi; Naoko Ohkama-Ohtsu; Hitoshi Sekimoto; Tadashi Yokoyama
Journal:  Microbes Environ       Date:  2017-03-17       Impact factor: 2.912

7.  Sinorhizobium fredii Strains HH103 and NGR234 Form Nitrogen Fixing Nodules With Diverse Wild Soybeans (Glycine soja) From Central China but Are Ineffective on Northern China Accessions.

Authors:  Francisco Temprano-Vera; Dulce Nombre Rodríguez-Navarro; Sebastian Acosta-Jurado; Xavier Perret; Romain K Fossou; Pilar Navarro-Gómez; Tao Zhen; Deshui Yu; Qi An; Ana Maria Buendía-Clavería; Javier Moreno; Francisco Javier López-Baena; Jose Enrique Ruiz-Sainz; Jose Maria Vinardell
Journal:  Front Microbiol       Date:  2018-11-21       Impact factor: 5.640

8.  Characterization of Rhizobia for the Improvement of Soybean Cultivation at Cold Conditions in Central Europe.

Authors:  Kun Yuan; Moritz Reckling; Maria Daniela Artigas Ramirez; Salem Djedidi; Izumi Fukuhara; Takuji Ohyama; Tadashi Yokoyama; Sonoko Dorothea Bellingrath-Kimura; Mosab Halwani; Dilfuza Egamberdieva; Naoko Ohkama-Ohtsu
Journal:  Microbes Environ       Date:  2020       Impact factor: 2.912

  8 in total

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