Literature DB >> 12582920

Preliminary genetic linkage map of Miscanthus sinensis with RAPD markers.

G. Atienza1, Z. Satovic, K. Petersen, O. Dolstra, A. Martín.   

Abstract

We have used an "offspring cross" mapping strategy in combination with the random amplified polymorphic DNA (RAPD) assay to construct the first genetic map of the species Miscanthus sinensis (2 n = 2 x = 38). This map is based on an outbred population of 89 individuals resulting from the cross between two genotypes from a previously designed cross. Consequently, both parents are fullsibs. The same proportion of bi-parental markers (heterozygotic in both parents) and pseudo-testcross markers (heterozygotic in one parent and null in the other), mono-parental markers, have been obtained. A total of 383 RAPD markers were analysed within the 89 F1 plants. Out of these markers, 257 were mapped into 28 linkage groups which spanned a total map length of around 1,074.5 cM with an average density of 4.2 cM per marker. Out of 257 mapped markers, 62 were inherited from F1.1 (P1), 63 from F1.7 (P7) and 132 were bi-parental markers. The contribution to the map was equal from both parents. This map provides a useful tool for genetic analyses of agronomically interesting characters in M. sinensis such as flowering, yield, plant height, stem diameter and mineral constitution. The offspring cross mapping strategy is proposed to obtain a higher efficiency in developing integrated maps including both parents.

Entities:  

Year:  2002        PMID: 12582920     DOI: 10.1007/s00122-002-0956-7

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  23 in total

1.  Biotechnology Towards Energy Crops.

Authors:  Theoni Margaritopoulou; Loukia Roka; Efi Alexopoulou; Myrsini Christou; Stamatis Rigas; Kosmas Haralampidis; Dimitra Milioni
Journal:  Mol Biotechnol       Date:  2016-03       Impact factor: 2.695

2.  SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum.

Authors:  Changsoo Kim; Dong Zhang; Susan A Auckland; Lisa K Rainville; Katrin Jakob; Brent Kronmiller; Erik J Sacks; Martin Deuter; Andrew H Paterson
Journal:  Theor Appl Genet       Date:  2012-01-25       Impact factor: 5.699

3.  Genetic mapping of QTLs controlling horticultural traits in diploid roses.

Authors:  M L Dugo; Z Satovic; T Millán; J I Cubero; D Rubiales; A Cabrera; A M Torres
Journal:  Theor Appl Genet       Date:  2005-05-19       Impact factor: 5.699

4.  A first linkage map of globe artichoke (Cynara cardunculus var. scolymus L.) based on AFLP, S-SAP, M-AFLP and microsatellite markers.

Authors:  S Lanteri; A Acquadro; C Comino; R Mauro; G Mauromicale; E Portis
Journal:  Theor Appl Genet       Date:  2006-03-25       Impact factor: 5.699

5.  DArT-based characterisation of genetic diversity in a Miscanthus collection from Poland.

Authors:  Jie Tang; Maurycy Daroch; Andrzej Kilian; Stanislaw Jeżowski; Marta Pogrzeba; Michal Mos
Journal:  Planta       Date:  2015-06-04       Impact factor: 4.116

6.  A first linkage map of pecan cultivars based on RAPD and AFLP markers.

Authors:  Sudheer R Beedanagari; Sue K Dove; Bruce W Wood; Patrick J Conner
Journal:  Theor Appl Genet       Date:  2005-03-22       Impact factor: 5.699

7.  Genetic analysis of the sugarcane (Saccharum spp.) cultivar 'LCP 85-384'. I. Linkage mapping using AFLP, SSR, and TRAP markers.

Authors:  Suman Andru; Yong-Bao Pan; Songkran Thongthawee; David M Burner; Collins A Kimbeng
Journal:  Theor Appl Genet       Date:  2011-04-07       Impact factor: 5.699

8.  Genomic and small RNA sequencing of Miscanthus x giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses.

Authors:  Kankshita Swaminathan; Magdy S Alabady; Kranthi Varala; Emanuele De Paoli; Isaac Ho; Dan S Rokhsar; Aru K Arumuganathan; Ray Ming; Pamela J Green; Blake C Meyers; Stephen P Moose; Matthew E Hudson
Journal:  Genome Biol       Date:  2010-02-03       Impact factor: 13.583

9.  A genetic linkage map of quinoa ( Chenopodium quinoa) based on AFLP, RAPD, and SSR markers.

Authors:  P J Maughan; A Bonifacio; E N Jellen; M R Stevens; C E Coleman; M Ricks; S L Mason; D E Jarvis; B W Gardunia; D J Fairbanks
Journal:  Theor Appl Genet       Date:  2004-08-12       Impact factor: 5.699

10.  Identification of QTLs influencing combustion quality in Miscanthus sinensis Anderss. II. Chlorine and potassium content.

Authors:  S G Atienza; Z Satovic; K K Petersen; O Dolstra; A Martín
Journal:  Theor Appl Genet       Date:  2003-03-14       Impact factor: 5.699

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.