Literature DB >> 12582704

Molecular characterization and similarity relationships among apricot ( Prunus armeniaca L.) genotypes using simple sequence repeats.

J.I. Hormaza1.   

Abstract

A collection of 48 apricot genotypes, originated from diverse geographic areas, have been screened with 37 SSR primer pairs developed in different species of Prunus in order to identify and characterize the genotypes and establish their genetic relations. Thirty one of those primer pairs resulted in correct amplifications and 20 produced polymorphic repeatable amplification patterns with the 48 genotypes studied. A total of 82 alleles were detected for the 20 loci. All the genotypes studied could be unequivocally distinguished with the combination of SSRs used. The results obtained evidence for the cross-species transportability of microsatellite sequences, allowing the discrimination among different genotypes of a given fruit-tree species with sequences developed in other species. UPGMA cluster analysis of the similarity data grouped the genotypes studied according to their geographic origin and/or their pedigree information.

Entities:  

Year:  2002        PMID: 12582704     DOI: 10.1007/s001220100684

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  23 in total

1.  Identification of microsatellite markers from Cicer reticulatum: molecular variation and phylogenetic analysis.

Authors:  Niroj Kumar Sethy; Shalu Choudhary; Bhumika Shokeen; Sabhyata Bhatia
Journal:  Theor Appl Genet       Date:  2005-11-19       Impact factor: 5.699

2.  SSR allelic variation in almond (Prunus dulcis Mill.).

Authors:  Hua Xie; Yi Sui; Feng-Qi Chang; Yong Xu; Rong-Cai Ma
Journal:  Theor Appl Genet       Date:  2005-11-24       Impact factor: 5.699

3.  Genetic fingerprinting of germplasm accessions as an aid for species conservation: a case study with Borderea chouardii (Dioscoreaceae), one of the most critically endangered Iberian plants.

Authors:  José Gabriel Segarra-Moragues; José María Iriondo; Pilar Catalán
Journal:  Ann Bot       Date:  2005-10-17       Impact factor: 4.357

4.  Genetic dissection of fruit maturity date in apricot (P. armeniaca L.) through a Single Primer Enrichment Technology (SPET) approach.

Authors:  Irina Baccichet; Remo Chiozzotto; Davide Scaglione; Daniele Bassi; Laura Rossini; Marco Cirilli
Journal:  BMC Genomics       Date:  2022-10-19       Impact factor: 4.547

5.  Development, characterization and variability analysis of microsatellites in lychee (Litchi chinensis Sonn., Sapindaceae).

Authors:  M A Viruel; J I Hormaza
Journal:  Theor Appl Genet       Date:  2003-11-05       Impact factor: 5.699

6.  Cloning and characterization of genomic DNA sequences of four self-incompatibility alleles in sweet cherry ( Prunus avium L.).

Authors:  A Wünsch; J I Hormaza
Journal:  Theor Appl Genet       Date:  2003-09-04       Impact factor: 5.699

7.  Molecular characterization of apricot germplasm from an old stone collection.

Authors:  Carolina Martín; María Herrero; José I Hormaza
Journal:  PLoS One       Date:  2011-08-25       Impact factor: 3.240

8.  Control of origin of sesame oil from various countries by stable isotope analysis and DNA based markers--a pilot study.

Authors:  Micha Horacek; Karin Hansel-Hohl; Kornel Burg; Gerhard Soja; Walter Okello-Anyanga; Silvia Fluch
Journal:  PLoS One       Date:  2015-04-01       Impact factor: 3.240

9.  An apricot (Prunus armeniaca L.) F2 progeny linkage map based on SSR and AFLP markers, mapping plum pox virus resistance and self-incompatibility traits.

Authors:  S Vilanova; C Romero; A G Abbott; G Llácer; M L Badenes
Journal:  Theor Appl Genet       Date:  2003-03-14       Impact factor: 5.574

10.  High-level genetic diversity and complex population structure of Siberian apricot (Prunus sibirica L.) in China as revealed by nuclear SSR markers.

Authors:  Zhe Wang; Ming Kang; Huabo Liu; Jiao Gao; Zhengdong Zhang; Yingyue Li; Rongling Wu; Xiaoming Pang
Journal:  PLoS One       Date:  2014-02-07       Impact factor: 3.240

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