Literature DB >> 12582233

Characterization of Arabidopsis thaliana ortholog of the human breast cancer susceptibility gene 1: AtBRCA1, strongly induced by gamma rays.

S Lafarge1, M-H Montané.   

Abstract

hBRCA1 is involved in 20-45% of inherited breast cancer cases and is implicated in many mechanisms involved in response to DNA damage. To date, BRCA1 orthologs have been characterized in vertebrate genomes only. We have identified the ortholog of BRCA1 in Arabidopsis thaliana. AtBRCA1 is a 5.5 kb part of the locus At4g21070. The corresponding mRNA of 3.5 kb is composed of 14 exons and encodes a 941 amino acid protein (104 kDa). AtBRCA1, which has one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain, shows a high similarity to hBRCA1 in these motifs and has the same characteristic molecular organization. We have also identified a putative ortholog in rice (OsBRCA1). With 941 and 968 amino acids, respectively, AtBRCA1 and OsBRCA1 are the shortest members of the BRCA1 family, and may represent a plant specificity. AtBRCA1 is expressed ubiquitously in plant tissues, at levels depending on organ type, with highest levels in flower buds and exponentially growing cell cultures. Increase of mRNA levels in all plant tissues 1 h after irradiation with the highest induction level of approximately 150 times for a 100 Gy dose is consistent with a putative role of AtBRCA1 in DNA repair and in cell-cycle control.

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Year:  2003        PMID: 12582233      PMCID: PMC150221          DOI: 10.1093/nar/gkg202

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  58 in total

1.  hCds1-mediated phosphorylation of BRCA1 regulates the DNA damage response.

Authors:  J S Lee; K M Collins; A L Brown; C H Lee; J H Chung
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

2.  Identification of a RING protein that can interact in vivo with the BRCA1 gene product.

Authors:  L C Wu; Z W Wang; J T Tsan; M A Spillman; A Phung; X L Xu; M C Yang; L Y Hwang; A M Bowcock; R Baer
Journal:  Nat Genet       Date:  1996-12       Impact factor: 38.330

3.  BRCA1 is a component of the RNA polymerase II holoenzyme.

Authors:  R Scully; S F Anderson; D M Chao; W Wei; L Ye; R A Young; D M Livingston; J D Parvin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-27       Impact factor: 11.205

4.  Human, canine and murine BRCA1 genes: sequence comparison among species.

Authors:  C I Szabo; L A Wagner; L V Francisco; J C Roach; R Argonza; M C King; E A Ostrander
Journal:  Hum Mol Genet       Date:  1996-09       Impact factor: 6.150

5.  An ATM homologue from Arabidopsis thaliana: complete genomic organisation and expression analysis.

Authors:  V Garcia; M Salanoubat; N Choisne; A Tissier
Journal:  Nucleic Acids Res       Date:  2000-04-15       Impact factor: 16.971

6.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

7.  Requirement of ATM-dependent phosphorylation of brca1 in the DNA damage response to double-strand breaks.

Authors:  D Cortez; Y Wang; J Qin; S J Elledge
Journal:  Science       Date:  1999-11-05       Impact factor: 47.728

8.  Association of BRCA1 with Rad51 in mitotic and meiotic cells.

Authors:  R Scully; J Chen; A Plug; Y Xiao; D Weaver; J Feunteun; T Ashley; D M Livingston
Journal:  Cell       Date:  1997-01-24       Impact factor: 41.582

9.  A strong candidate for the breast and ovarian cancer susceptibility gene BRCA1.

Authors:  Y Miki; J Swensen; D Shattuck-Eidens; P A Futreal; K Harshman; S Tavtigian; Q Liu; C Cochran; L M Bennett; W Ding
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

10.  Isolation of the mouse homologue of BRCA1 and genetic mapping to mouse chromosome 11.

Authors:  L M Bennett; A Haugen-Strano; C Cochran; H A Brownlee; F T Fiedorek; R W Wiseman
Journal:  Genomics       Date:  1995-10-10       Impact factor: 5.736

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  36 in total

1.  In-depth sequence analysis of the tomato chromosome 12 centromeric region: identification of a large CAA block and characterization of pericentromere retrotranposons.

Authors:  Tae-Jin Yang; Seunghee Lee; Song-Bin Chang; Yeisoo Yu; Hans de Jong; Rod A Wing
Journal:  Chromosoma       Date:  2005-06-17       Impact factor: 4.316

2.  Polyamines alleviate the inhibitory effect of the DNA cross-linking agent mitomycin C on root growth.

Authors:  Hidenori Tanaka; Kazuya Takeda; Akihiro Imai
Journal:  Plant Signal Behav       Date:  2019-08-26

3.  A DNA2 Homolog Is Required for DNA Damage Repair, Cell Cycle Regulation, and Meristem Maintenance in Plants.

Authors:  Ning Jia; Xiaomin Liu; Hongbo Gao
Journal:  Plant Physiol       Date:  2016-03-07       Impact factor: 8.340

4.  Differentially expressed genes in response to gamma-irradiation during the vegetative stage in Arabidopsis thaliana.

Authors:  Jin-Baek Kim; Sang Hoon Kim; Bo-Keun Ha; Si-Yong Kang; Cheol Seong Jang; Yong Weon Seo; Dong Sub Kim
Journal:  Mol Biol Rep       Date:  2014-01-19       Impact factor: 2.316

Review 5.  Minding the gap: the underground functions of BRCA1 and BRCA2 at stalled replication forks.

Authors:  Ganesh Nagaraju; Ralph Scully
Journal:  DNA Repair (Amst)       Date:  2007-03-26

6.  ATR regulates a G2-phase cell-cycle checkpoint in Arabidopsis thaliana.

Authors:  Kevin Culligan; Alain Tissier; Anne Britt
Journal:  Plant Cell       Date:  2004-04-09       Impact factor: 11.277

7.  The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis.

Authors:  Wuxing Li; Changbin Chen; Ullrich Markmann-Mulisch; Ljudmilla Timofejeva; Elmon Schmelzer; Hong Ma; Bernd Reiss
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-12       Impact factor: 11.205

8.  The ATM-dependent DNA damage response acts as an upstream trigger for compensation in the fas1 mutation during Arabidopsis leaf development.

Authors:  Tetsuya Hisanaga; Ali Ferjani; Gorou Horiguchi; Naoko Ishikawa; Ushio Fujikura; Minoru Kubo; Taku Demura; Hiroo Fukuda; Takashi Ishida; Keiko Sugimoto; Hirokazu Tsukaya
Journal:  Plant Physiol       Date:  2013-04-24       Impact factor: 8.340

9.  BARD1 may be renamed ROW1 because it functions mainly as a REPRESSOR OF WUSCHEL1.

Authors:  Pei Han; Yu-Xian Zhu
Journal:  Plant Signal Behav       Date:  2009-01

10.  Transgenerational stress memory is not a general response in Arabidopsis.

Authors:  Ales Pecinka; Marisa Rosa; Adam Schikora; Marc Berlinger; Heribert Hirt; Christian Luschnig; Ortrun Mittelsten Scheid
Journal:  PLoS One       Date:  2009-04-21       Impact factor: 3.240

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