Literature DB >> 12581659

RNA-modifying enzymes.

Adrian R Ferré-D'Amaré1.   

Abstract

A bewildering number of post-transcriptional modifications are introduced into cellular RNAs by enzymes that are often conserved among archaea, bacteria and eukaryotes. The modifications range from those with well-understood functions, such as tRNA aminoacylation, to widespread but more mysterious ones, such as pseudouridylation. Recent structure determinations have included two types of RNA nucleobase modifying enzyme: pseudouridine synthases and tRNA guanine transglycosylases.

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Year:  2003        PMID: 12581659     DOI: 10.1016/s0959-440x(02)00002-7

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  29 in total

1.  Use of a coenzyme by the glmS ribozyme-riboswitch suggests primordial expansion of RNA chemistry by small molecules.

Authors:  Adrian R Ferré-D'Amaré
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

2.  Crystal structure of the highly divergent pseudouridine synthase TruD reveals a circular permutation of a conserved fold.

Authors:  Charmaine Hoang; Adrian R Ferre-D'Amare
Journal:  RNA       Date:  2004-07       Impact factor: 4.942

3.  Precursor complex structure of pseudouridine synthase TruB suggests coupling of active site perturbations to an RNA-sequestering peripheral protein domain.

Authors:  Charmaine Hoang; Christopher S Hamilton; Eugene G Mueller; Adrian R Ferré-D'Amaré
Journal:  Protein Sci       Date:  2005-06-29       Impact factor: 6.725

Review 4.  How a single protein complex accommodates many different H/ACA RNAs.

Authors:  U Thomas Meier
Journal:  Trends Biochem Sci       Date:  2006-05-02       Impact factor: 13.807

Review 5.  Unveiling substrate RNA binding to H/ACA RNPs: one side fits all.

Authors:  Hong Li
Journal:  Curr Opin Struct Biol       Date:  2008-02       Impact factor: 6.809

Review 6.  The box H/ACA ribonucleoprotein complex: interplay of RNA and protein structures in post-transcriptional RNA modification.

Authors:  Tomoko Hamma; Adrian R Ferré-D'Amaré
Journal:  J Biol Chem       Date:  2009-11-16       Impact factor: 5.157

7.  XG-PseU: an eXtreme Gradient Boosting based method for identifying pseudouridine sites.

Authors:  Kewei Liu; Wei Chen; Hao Lin
Journal:  Mol Genet Genomics       Date:  2019-08-07       Impact factor: 3.291

8.  Characterization and vaccination of two novel Schistosoma japonicum genes screened from a cercaria cDNA library.

Authors:  Zhi Tian; Shi-Ping Wang; Shao-Hua Zeng; Xue-Qin Liu; Dong-Mei Gao; Qi-Mei Feng; Shu-Ju Zhang; Yun-Fei Zhou; Xi-Ya Wang; Ying-Ding Xia
Journal:  Parasitol Res       Date:  2011-07-08       Impact factor: 2.289

9.  Telomerase RNA level limits telomere maintenance in X-linked dyskeratosis congenita.

Authors:  Judy M Y Wong; Kathleen Collins
Journal:  Genes Dev       Date:  2006-10-02       Impact factor: 11.361

10.  Structure of the thiostrepton resistance methyltransferase.S-adenosyl-L-methionine complex and its interaction with ribosomal RNA.

Authors:  Mark S Dunstan; Pei C Hang; Natalia V Zelinskaya; John F Honek; Graeme L Conn
Journal:  J Biol Chem       Date:  2009-04-15       Impact factor: 5.157

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