Literature DB >> 12574133

p53 is a chromatin accessibility factor for nucleotide excision repair of DNA damage.

Carlos P Rubbi1, Jo Milner.   

Abstract

One of the longest standing problems in DNA repair is how cells relax chromatin in order to make DNA lesions accessible for global nucleotide excision repair (NER). Since chromatin has to be relaxed for efficient lesion detection, the key question is whether chromatin relaxation precedes lesion detection or vice versa. Chromatin accessibility factors have been proposed but not yet identified. Here we show that p53 acts as a chromatin accessibility factor, mediating UV-induced global chromatin relaxation. Using localized subnuclear UV irradiation, we demonstrate that chromatin relaxation is extended over the whole nucleus and that this process requires p53. We show that the sequence for initiation of global NER is as follows: transcription-associated lesion detection; p53-mediated global chromatin relaxation; and global lesion detection. The tumour suppressor p53 is crucial for genomic stability, a role partially explained by its pro-apoptotic capacity. We demonstrate here that p53 is also a fundamental component of DNA repair, playing a direct role in rectifying DNA damage.

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Year:  2003        PMID: 12574133      PMCID: PMC145442          DOI: 10.1093/emboj/cdg082

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  45 in total

Review 1.  Light and dark in chromatin repair: repair of UV-induced DNA lesions by photolyase and nucleotide excision repair.

Authors:  F Thoma
Journal:  EMBO J       Date:  1999-12-01       Impact factor: 11.598

2.  Non-activated p53 co-localizes with sites of transcription within both the nucleoplasm and the nucleolus.

Authors:  C P Rubbi; J Milner
Journal:  Oncogene       Date:  2000-01-06       Impact factor: 9.867

Review 3.  Molecular mechanism of nucleotide excision repair.

Authors:  W L de Laat; N G Jaspers; J H Hoeijmakers
Journal:  Genes Dev       Date:  1999-04-01       Impact factor: 11.361

4.  Controlling the efficiency of excision repair.

Authors:  P C Hanawalt
Journal:  Mutat Res       Date:  2001-02-25       Impact factor: 2.433

5.  DNA damage in the nucleosome core is refractory to repair by human excision nuclease.

Authors:  R Hara; J Mo; A Sancar
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

Review 6.  The role of nucleotide excision repair and loss of p53 in mutagenesis and carcinogenesis.

Authors:  H van Steeg
Journal:  Toxicol Lett       Date:  2001-03-31       Impact factor: 4.372

7.  Kinetics of p53 binding to promoter sites in vivo.

Authors:  S T Szak; D Mays; J A Pietenpol
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

Review 8.  Histone deacetylase inhibitors: inducers of differentiation or apoptosis of transformed cells.

Authors:  P A Marks; V M Richon; R A Rifkind
Journal:  J Natl Cancer Inst       Date:  2000-08-02       Impact factor: 13.506

9.  p53-degradation by HPV-16 E6 preferentially affects the removal of cyclobutane pyrimidine dimers from non-transcribed strand and sensitizes mammary epithelial cells to UV-irradiation.

Authors:  M A El-Mahdy; F M Hamada; M A Wani; Q Zhu; A A Wani
Journal:  Mutat Res       Date:  2000-03-20       Impact factor: 2.433

10.  Chromatin condensation and sensitivity of DNA in situ to denaturation during cell cycle and apoptosis--a confocal microscopy study.

Authors:  J Dobrucki; Z Darzynkiewicz
Journal:  Micron       Date:  2001-10       Impact factor: 2.251

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  83 in total

Review 1.  Cockayne syndrome group B cellular and biochemical functions.

Authors:  Cecilie Löe Licht; Tinna Stevnsner; Vilhelm A Bohr
Journal:  Am J Hum Genet       Date:  2003-11-24       Impact factor: 11.025

2.  Phosphorylation of XPB helicase regulates TFIIH nucleotide excision repair activity.

Authors:  Frédéric Coin; Jérome Auriol; Angel Tapias; Pascale Clivio; Wim Vermeulen; Jean-Marc Egly
Journal:  EMBO J       Date:  2004-11-18       Impact factor: 11.598

3.  Aurora A mediates cross-talk between N- and C-terminal post-translational modifications of p53.

Authors:  Lorna Jane Warnock; Sally Anne Raines; Jo Milner
Journal:  Cancer Biol Ther       Date:  2011-12-15       Impact factor: 4.742

4.  DNA multiphoton absorption generates localized damage for studying repair dynamics in live cells.

Authors:  Matthew K Daddysman; Christopher J Fecko
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

Review 5.  Phylogeny and function of the invertebrate p53 superfamily.

Authors:  Rachael Rutkowski; Kay Hofmann; Anton Gartner
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-05       Impact factor: 10.005

Review 6.  Chromatin dynamics and the repair of DNA double strand breaks.

Authors:  Ye Xu; Brendan D Price
Journal:  Cell Cycle       Date:  2011-01-15       Impact factor: 4.534

7.  Downregulation of SWI/SNF chromatin remodeling factor subunits modulates cisplatin cytotoxicity.

Authors:  Anbarasi Kothandapani; Kathirvel Gopalakrishnan; Bhaskar Kahali; David Reisman; Steve M Patrick
Journal:  Exp Cell Res       Date:  2012-06-18       Impact factor: 3.905

8.  Chromatin immunoprecipitation-based screen to identify functional genomic binding sites for sequence-specific transactivators.

Authors:  Jamie M Hearnes; Deborah J Mays; Kristy L Schavolt; Luojia Tang; Xin Jiang; Jennifer A Pietenpol
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

9.  The DNA binding activity of p53 displays reaction-diffusion kinetics.

Authors:  Peter Hinow; Carl E Rogers; Christopher E Barbieri; Jennifer A Pietenpol; Anne K Kenworthy; Emmanuele DiBenedetto
Journal:  Biophys J       Date:  2006-04-07       Impact factor: 4.033

10.  Local action of the chromatin assembly factor CAF-1 at sites of nucleotide excision repair in vivo.

Authors:  Catherine M Green; Geneviève Almouzni
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

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