Literature DB >> 12569772

[The identification of recombinant HIV-1 strains in IDUs in southwest and northwest China].

Y Shao1, F Zhao, W Yang.   

Abstract

OBJECTIVE: To search for possible recombination of HIV-1 strains in China.
METHODS: The blood samples were collected from the HIV infected individuals in areas where epidemic of more than two subtypes of HIV-1 were found. The HIV env and tat genes were amplified by nested PCR from PBMCs and directly sequenced and analyzed.
RESULTS: The sequence analysis were performed on 14 HIV-1 strains collected in the subtype B' and C epidemic areas of China. No evidence of recombination after sequencing of env was found. The recombnant HIV-1 strains of subtype B' and C were found in 10 of the 14 samples tested when the first exon of the tat gene was sequenced. In addition, three subtype B' and one subtype C non-recombinant HIV-1 strains were found among IDUs in Sichuan Province.
CONCLUSIONS: The recombinant HIV-1 strains of subtype B' and C were firstly identified in Sichuan Province of southwest China and Xinjiang Autonomous Region of western China. Their identical sequences and recombinant patterns indicated the same origin of the recombinant strains, it strongly indicates a close correlation between these two HIV epidemic regions. Since no other subtype of HIV-1 except the recombinant was found in Xinjiang, whereas both subtype B and C as well as B'/C recombinant were found in Sichuan, the recombination was most probably happened in Sichuan Province rather than in Xinjiang.

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Year:  1999        PMID: 12569772

Source DB:  PubMed          Journal:  Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi        ISSN: 1003-9279


  16 in total

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Authors:  Yi Feng; Huamian Wei; Jenny Hsi; Hui Xing; Xiang He; Lingjie Liao; Yanling Ma; Chuanyi Ning; Nidan Wang; Yutaka Takebe; Yiming Shao
Journal:  AIDS Res Hum Retroviruses       Date:  2014-01-04       Impact factor: 2.205

2.  Five new CRF07_BC near full-length sequences isolated from Sichuan, China.

Authors:  Zhefeng Meng; Ruolei Xin; Yassir F Abubakar; Jun Sun; Huanmei Wu; Jianxin Lu; Ya Ni; Xiaoyan Zhang; Jianqing Xu
Journal:  AIDS Res Hum Retroviruses       Date:  2012-08-29       Impact factor: 2.205

3.  Characteristics of HIV-1 Molecular Epidemiology in Suzhou, China, from 2009 to 2014.

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4.  The HIV-1 epidemic: low- to middle-income countries.

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5.  Testing the hypothesis of a recombinant origin of human immunodeficiency virus type 1 subtype E.

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Authors:  Yan Xiao; Sibylle Kristensen; Jiangping Sun; Lin Lu; Sten H Vermund
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7.  Sequence analysis of the gag-pol gene of human immunodeficiency virus type 1 of intersubtype (B'/C) recombinant strain in Beijing, China.

Authors:  Jing-rong Ye; Ruo-lei Xin; Li-shi Bai; Hong-yan Lu; Shuang-qin Yu; Yi Zeng
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8.  Identification of subtype B, multiple circulating recombinant forms and unique recombinants of HIV type 1 in an MSM cohort in China.

Authors:  Wanhai Wang; Shulin Jiang; Shenwei Li; Kai Yang; Liying Ma; Fengmin Zhang; Xiaoyan Zhang; Yiming Shao
Journal:  AIDS Res Hum Retroviruses       Date:  2008-10       Impact factor: 2.205

9.  Simple subtyping assay for human immunodeficiency virus type 1 subtypes B, C, CRF01-AE, CRF07-BC, and CRF08-BC.

Authors:  Min Wei; Qi Guan; Hao Liang; Jianping Chen; Zhao Chen; Faxin Hei; Yi Feng; Kunxue Hong; Hailong Huang; Hui Xing; Yiming Shao
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Review 10.  HIV Epidemic in Asia: Implications for HIV Vaccine and Other Prevention Trials.

Authors:  Nittaya Phanuphak; Ying-Ru Lo; Yiming Shao; Sunil Suhas Solomon; Robert J O'Connell; Sodsai Tovanabutra; David Chang; Jerome H Kim; Jean Louis Excler
Journal:  AIDS Res Hum Retroviruses       Date:  2015-06-24       Impact factor: 2.205

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