Literature DB >> 12568722

A simple Cre-loxP method for chromosomal N-terminal tagging of essential and non-essential Schizosaccharomyces pombe genes.

Petra J H Werler1, Edgar Hartsuiker, Antony M Carr.   

Abstract

To facilitate the N-terminal tagging of essential genes at their genomic locus and under control of their own promoters we have developed a series of novel polymerase chain reaction templates. Initially, a 1.8 kb DNA fragment is integrated upstream of the ATG of the gene of interest. This fragment encodes the tag, a loxP site, a selectable marker, an exogenous nmt1 promoter and a second loxP site. In a single homologous integration event, the gene of interest is placed under control of the thiamine regulated nmt1 promoter, allowing identification of potential integrants on the basis of phenotype. Subsequently, this integrant strain is transformed with a plasmid expressing the Cre recombinase. This results in excision of the marker and nmt1 promoter and leaves sequences encoding an in-frame tag at the N-terminus of the gene of interest under the control of its native promoter. We have created TAP-cdc22, TAP-suc22 and TAP-rad50 strains using this N-tagging system, and developed a range of vectors for introducing TAP-, (His)10HA-, (His)6Myc- and EGFP.

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Year:  2003        PMID: 12568722     DOI: 10.1016/s0378-1119(03)00402-5

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  16 in total

1.  Cop9/signalosome subunits and Pcu4 regulate ribonucleotide reductase by both checkpoint-dependent and -independent mechanisms.

Authors:  Cong Liu; Kelly A Powell; Kirsten Mundt; LeJung Wu; Antony M Carr; Thomas Caspari
Journal:  Genes Dev       Date:  2003-04-14       Impact factor: 11.361

2.  Marker fusion tagging, a new method for production of chromosomally encoded fusion proteins.

Authors:  Julian Lai; Seng Kah Ng; Fang Fang Liu; Rajesh Narhari Patkar; Yanfen Lu; Jing Ru Chan; Angayarkanni Suresh; Naweed Naqvi; Gregory Jedd
Journal:  Eukaryot Cell       Date:  2010-03-26

3.  Fission yeast RecQ helicase Rqh1 is required for the maintenance of circular chromosomes.

Authors:  Tomoko Nanbu; Katsunori Takahashi; Johanne M Murray; Naoya Hirata; Shinobu Ukimori; Mai Kanke; Hisao Masukata; Masashi Yukawa; Eiko Tsuchiya; Masaru Ueno
Journal:  Mol Cell Biol       Date:  2013-01-07       Impact factor: 4.272

4.  Establishment of a Cre-loxP System Based on a Leaky LAC4 Promoter and an Unstable panARS Element in Kluyveromyces marxianus.

Authors:  Haiyan Ren; Anqi Yin; Pingping Wu; Huanyu Zhou; Jungang Zhou; Yao Yu; Hong Lu
Journal:  Microorganisms       Date:  2022-06-17

5.  Oxygen-dependent binding of Nro1 to the prolyl hydroxylase Ofd1 regulates SREBP degradation in yeast.

Authors:  Chih-Yung S Lee; Emerson V Stewart; Bridget T Hughes; Peter J Espenshade
Journal:  EMBO J       Date:  2009-01-21       Impact factor: 11.598

6.  The Schizosaccharomyces pombe Pfh1p DNA helicase is essential for the maintenance of nuclear and mitochondrial DNA.

Authors:  Stefan F Pinter; Sarah D Aubert; Virginia A Zakian
Journal:  Mol Cell Biol       Date:  2008-08-25       Impact factor: 4.272

7.  F-box-directed CRL complex assembly and regulation by the CSN and CAND1.

Authors:  Michael W Schmidt; Philip R McQuary; Susan Wee; Kay Hofmann; Dieter A Wolf
Journal:  Mol Cell       Date:  2009-09-11       Impact factor: 17.970

8.  ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.

Authors:  Gareth J Williams; R Scott Williams; Jessica S Williams; Gabriel Moncalian; Andrew S Arvai; Oliver Limbo; Grant Guenther; Soumita SilDas; Michal Hammel; Paul Russell; John A Tainer
Journal:  Nat Struct Mol Biol       Date:  2011-03-27       Impact factor: 15.369

9.  A genomewide screen for suppressors of Alu-mediated rearrangements reveals a role for PIF1.

Authors:  Karen M Chisholm; Sarah D Aubert; Krister P Freese; Virginia A Zakian; Mary-Claire King; Piri L Welcsh
Journal:  PLoS One       Date:  2012-02-09       Impact factor: 3.240

10.  Competition between the Rad50 complex and the Ku heterodimer reveals a role for Exo1 in processing double-strand breaks but not telomeres.

Authors:  Kazunori Tomita; Akira Matsuura; Thomas Caspari; Antony M Carr; Yufuko Akamatsu; Hiroshi Iwasaki; Ken-ichi Mizuno; Kunihiro Ohta; Masahiro Uritani; Takashi Ushimaru; Koichi Yoshinaga; Masaru Ueno
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

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