Literature DB >> 12568624

Shattering of Peptide ions on self-assembled monolayer surfaces.

Julia Laskin1, Thomas H Bailey, Jean H Futrell.   

Abstract

Time- and collision energy-resolved surface-induced dissociation (SID) of des-Arg(1)- and des-Arg(9)-bradykinin on a fluorinated self-assembled monolayer (SAM) surface was studied by use of a novel Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) specially equipped to perform SID experiments. Time-resolved fragmentation efficiency curves (TFECs) were modeled by an RRKM-based approach developed in our laboratory that utilizes a very flexible analytical expression for the internal energy deposition function capable of reproducing both single- and multiple-collision activation in the gas phase and excitation by collisions with a surface. Both experimental observations and modeling establish a very sharp transition in the dynamics of ion-surface interaction: the shattering transition. The experimental signature for this transition is the appearance of prompt (time-independent) fragmentation, which becomes dominant at high collision energies. Shattering opens a variety of dissociation pathways that are not accessible to slow collisional and thermal ion activation. This results in much better sequence coverage for the singly protonated peptides than dissociation patterns obtained with any of the slow activation methods. Modeling demonstrated that, for short reaction delays, dissociation of these peptides is solely determined by shattering. Internal energies required for shattering transition are approximately the same for des-Arg(1) and des-Arg(9)-bradykinin, resulting in the overlap of fragmentation efficiency curves obtained at short reaction delays. At longer delay times, parent ions depletion is mainly determined by a slow decay rate and fragmentation efficiency curves for des-Arg(1) and des-Arg(9)-bradykinin diverge. Dissociation thresholds of 1.17 and 1.09 eV and activation entropies of -22.2 and -23.3 cal/(mol K) were obtained for des-Arg(1) and des-Arg(9)-bradykinin from RRKM modeling of time-resolved data. Dissociation parameters for des-Arg(1)-bradykinin are in good agreement with parameters derived from thermal experiments. However, there is a significant discrepancy between the thermal data and dissociation parameters for des-Arg(9)-bradykinin obtained in this study. The difference is attributed to the differences in conformations that undergo thermal activation and activation by ion-surface collisions prior to dissociation.

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Year:  2003        PMID: 12568624     DOI: 10.1021/ja027915t

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

Review 1.  Surface-induced dissociation of peptide ions: kinetics and dynamics.

Authors:  Julia Laskin; Jean H Futrell
Journal:  J Am Soc Mass Spectrom       Date:  2003-12       Impact factor: 3.109

2.  Enhanced characterization of singly protonated phosphopeptide ions by femtosecond laser-induced ionization/dissociation tandem mass spectrometry (fs-LID-MS/MS).

Authors:  Scott A Smith; Christine L Kalcic; Kyle A Safran; Paul M Stemmer; Marcos Dantus; Gavin E Reid
Journal:  J Am Soc Mass Spectrom       Date:  2010-10-01       Impact factor: 3.109

3.  Factors that impact the vacuum ultraviolet photofragmentation of peptide ions.

Authors:  Matthew S Thompson; Weidong Cui; James P Reilly
Journal:  J Am Soc Mass Spectrom       Date:  2007-04-29       Impact factor: 3.109

Review 4.  Surface-induced dissociation of small molecules, peptides, and non-covalent protein complexes.

Authors:  Vicki H Wysocki; Karen E Joyce; Christopher M Jones; Richard L Beardsley
Journal:  J Am Soc Mass Spectrom       Date:  2007-11-19       Impact factor: 3.109

5.  Fragmentation mechanisms of oxidized peptides elucidated by SID, RRKM modeling, and molecular dynamics.

Authors:  Jeffrey M Spraggins; Julie A Lloyd; Murray V Johnston; Julia Laskin; Douglas P Ridge
Journal:  J Am Soc Mass Spectrom       Date:  2009-05-04       Impact factor: 3.109

6.  Measuring internal energy deposition in collisional activation using hydrated ion nanocalorimetry to obtain peptide dissociation energies and entropies.

Authors:  Maria Demireva; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-09       Impact factor: 3.109

7.  Rapid Determination of Activation Energies for Gas-Phase Protein Unfolding and Dissociation in a Q-IM-ToF Mass Spectrometer.

Authors:  Micah T Donor; Samantha O Shepherd; James S Prell
Journal:  J Am Soc Mass Spectrom       Date:  2020-02-20       Impact factor: 3.109

8.  Comparative studies of 193-nm photodissociation and TOF-TOFMS analysis of bradykinin analogues: the effects of charge site(s) and fragmentation timescales.

Authors:  Joseph W Morgan; David H Russell
Journal:  J Am Soc Mass Spectrom       Date:  2006-03-15       Impact factor: 3.109

9.  Kinetics of surface-induced dissociation of N(CH3)4(+) and N(CD3)4(+) using silicon nanoparticle assisted laser desorption/ionization and laser desorption/ionization.

Authors:  Sung Hwan Yoon; Chaminda M Gamage; Kent J Gillig; Vicki H Wysocki
Journal:  J Am Soc Mass Spectrom       Date:  2009-03-06       Impact factor: 3.109

10.  Importance of shattering fragmentation in the surface-induced dissociation of protonated octaglycine.

Authors:  Kyoyeon Park; Bipasha Deb; Kihyung Song; William L Hase
Journal:  J Am Soc Mass Spectrom       Date:  2009-03-04       Impact factor: 3.109

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