Literature DB >> 12567189

Natural variation in human gene expression assessed in lymphoblastoid cells.

Vivian G Cheung1, Laura K Conlin, Teresa M Weber, Melissa Arcaro, Kuang-Yu Jen, Michael Morley, Richard S Spielman.   

Abstract

The sequencing of the human genome has resulted in greater attention to genetic variation among individuals, and variation at the DNA sequence level is now being extensively studied. At the same time, it has become possible to study variation at the level of gene expression by various methods. At present, it is largely unknown how widespread this variation in transcript levels is over the entire genome and to what extent individual differences in expression level are genetically determined. In the present study, we used lymphoblastoid cells to examine variation in gene expression and identified genes whose transcript levels differed greatly among unrelated individuals. We also found evidence for familial aggregation of expression phenotype by comparing variation among unrelated individuals, among siblings within families and between monozygotic twins. These observations suggest that there is a genetic contribution to polymorphic variation in the level of gene expression.

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Year:  2003        PMID: 12567189     DOI: 10.1038/ng1094

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  281 in total

1.  Quantitative-genetic analysis of wing form and bilateral asymmetry in isochromosomal lines of Drosophila subobscura using Procrustes methods.

Authors:  Pedro Fernández Iriarte; Walkiria Céspedes; Mauro Santos
Journal:  J Genet       Date:  2003-12       Impact factor: 1.166

2.  Gene expression from the aneuploid chromosome in a trisomy mouse model of down syndrome.

Authors:  Robert Lyle; Corinne Gehrig; Charlotte Neergaard-Henrichsen; Samuel Deutsch; Stylianos E Antonarakis
Journal:  Genome Res       Date:  2004-07       Impact factor: 9.043

3.  Extensive sex-specific nonadditivity of gene expression in Drosophila melanogaster.

Authors:  Greg Gibson; Rebecca Riley-Berger; Larry Harshman; Artyom Kopp; Scott Vacha; Sergey Nuzhdin; Marta Wayne
Journal:  Genetics       Date:  2004-08       Impact factor: 4.562

4.  Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent.

Authors:  Joseph E Powell; Anjali K Henders; Allan F McRae; Margaret J Wright; Nicholas G Martin; Emmanouil T Dermitzakis; Grant W Montgomery; Peter M Visscher
Journal:  Genome Res       Date:  2011-12-19       Impact factor: 9.043

5.  Chromosomal variation in lymphoblastoid cell lines.

Authors:  Matthew D Shirley; Joseph D Baugher; Eric L Stevens; Zhenya Tang; Norman Gerry; Christine M Beiswanger; Dorit S Berlin; Jonathan Pevsner
Journal:  Hum Mutat       Date:  2012-04-16       Impact factor: 4.878

6.  Functional consequences of PRPF39 on distant genes and cisplatin sensitivity.

Authors:  Amy L Stark; Shannon M Delaney; Heather E Wheeler; Hae Kyung Im; M Eileen Dolan
Journal:  Hum Mol Genet       Date:  2012-07-05       Impact factor: 6.150

7.  Mapping of numerous disease-associated expression polymorphisms in primary peripheral blood CD4+ lymphocytes.

Authors:  Amy Murphy; Jen-Hwa Chu; Mousheng Xu; Vincent J Carey; Ross Lazarus; Andy Liu; Stanley J Szefler; Robert Strunk; Karen Demuth; Mario Castro; Nadia N Hansel; Gregory B Diette; Becky M Vonakis; N Franklin Adkinson; Barbara J Klanderman; Jody Senter-Sylvia; John Ziniti; Christoph Lange; Tomi Pastinen; Benjamin A Raby
Journal:  Hum Mol Genet       Date:  2010-09-10       Impact factor: 6.150

8.  Systems genetics: the added value of gene expression.

Authors:  Peter M Visscher; Michael E Goddard
Journal:  HFSP J       Date:  2010-01-29

9.  Identification of the Bile Acid Transporter Slco1a6 as a Candidate Gene That Broadly Affects Gene Expression in Mouse Pancreatic Islets.

Authors:  Jianan Tian; Mark P Keller; Angie T Oler; Mary E Rabaglia; Kathryn L Schueler; Donald S Stapleton; Aimee Teo Broman; Wen Zhao; Christina Kendziorski; Brian S Yandell; Bruno Hagenbuch; Karl W Broman; Alan D Attie
Journal:  Genetics       Date:  2015-09-18       Impact factor: 4.562

10.  A genome-wide analysis identifies genetic variants in the RELN gene associated with otosclerosis.

Authors:  Isabelle Schrauwen; Megan Ealy; Matthew J Huentelman; Melissa Thys; Nils Homer; Kathleen Vanderstraeten; Erik Fransen; Jason J Corneveaux; David W Craig; Mireille Claustres; Cor W R J Cremers; Ingeborg Dhooge; Paul Van de Heyning; Robert Vincent; Erwin Offeciers; Richard J H Smith; Guy Van Camp
Journal:  Am J Hum Genet       Date:  2009-02-19       Impact factor: 11.025

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