Literature DB >> 12566010

Advances in quantitative proteomics via stable isotope tagging and mass spectrometry.

W Andy Tao1, Ruedi Aebersold.   

Abstract

The high-throughput identification and accurate quantification of proteins are essential components of proteomic strategies for studying cellular functions and processes. Techniques that are largely based on stable isotope protein or peptide labeling and automated tandem mass spectrometry are increasingly being applied in quantitative proteomic studies. Over the past year, significant progress has been made toward improving and diversifying these technologies with respect to the methods for stable isotope labeling, process automation and data processing and analysis. Advances in stable isotope protein labeling and recent biological studies that used stable isotope based quantitative proteomics techniques are reviewed.

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Year:  2003        PMID: 12566010     DOI: 10.1016/s0958-1669(02)00018-6

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  42 in total

1.  An isotope labeling strategy for quantifying the degree of phosphorylation at multiple sites in proteins.

Authors:  Adrian D Hegeman; Amy C Harms; Michael R Sussman; Anne E Bunner; Jeffrey F Harper
Journal:  J Am Soc Mass Spectrom       Date:  2004-05       Impact factor: 3.109

Review 2.  Neuropeptide-processing enzymes: applications for drug discovery.

Authors:  Lloyd D Fricker
Journal:  AAPS J       Date:  2005-10-05       Impact factor: 4.009

Review 3.  Advances in proteomics data analysis and display using an accurate mass and time tag approach.

Authors:  Jennifer S D Zimmer; Matthew E Monroe; Wei-Jun Qian; Richard D Smith
Journal:  Mass Spectrom Rev       Date:  2006 May-Jun       Impact factor: 10.946

4.  Combined chemical and enzymatic stable isotope labeling for quantitative profiling of detergent-insoluble membrane proteins isolated using Triton X-100 and Brij-96.

Authors:  Josip Blonder; Li-Rong Yu; Galina Radeva; King C Chan; David A Lucas; Timothy J Waybright; Haleem J Issaq; Frances J Sharom; Timothy D Veenstra
Journal:  J Proteome Res       Date:  2006-02       Impact factor: 4.466

5.  Quantitative proteome analysis using D-labeled N-ethylmaleimide and 13C-labeled iodoacetanilide by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Sadamu Kurono; Tamie Kurono; Naoka Komori; Satomi Niwayama; Hiroyuki Matsumoto
Journal:  Bioorg Med Chem       Date:  2006-10-16       Impact factor: 3.641

6.  Microwave assisted acid cleavage for denaturation and proteolysis of intact human adenovirus.

Authors:  Catherine Fenselau; Olli Laine; Stephen Swatkoski
Journal:  Int J Mass Spectrom       Date:  2011-03-30       Impact factor: 1.986

7.  Investigating quantitation of phosphorylation using MALDI-TOF mass spectrometry.

Authors:  Laurie Parker; Aaron Engel-Hall; Kevin Drew; George Steinhardt; Donald L Helseth; David Jabon; Timothy McMurry; David S Angulo; Stephen J Kron
Journal:  J Mass Spectrom       Date:  2008-04       Impact factor: 1.982

8.  Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism.

Authors:  Boris Zybailov; Giulia Friso; Jitae Kim; Andrea Rudella; Verenice Ramírez Rodríguez; Yukari Asakura; Qi Sun; Klaas J van Wijk
Journal:  Mol Cell Proteomics       Date:  2009-08       Impact factor: 5.911

9.  Isotope-Encoded Carboxyl Group Footprinting for Mass Spectrometry-Based Protein Conformational Studies.

Authors:  Hao Zhang; Haijun Liu; Robert E Blankenship; Michael L Gross
Journal:  J Am Soc Mass Spectrom       Date:  2015-09-18       Impact factor: 3.109

10.  Quantitative proteomic analysis of mitochondria from primary neuron cultures treated with amyloid beta peptide.

Authors:  Mark A Lovell; Shuling Xiong; William R Markesbery; Bert C Lynn
Journal:  Neurochem Res       Date:  2005-01       Impact factor: 3.996

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