Literature DB >> 12557395

[Analysis the influence of palindrome structure to gene expression by constructing combination system].

Rui Zhang1, Sandui Guo, Maozhi Ren.   

Abstract

Palindrome sequence is very common in DNA, it usually acts as cis-elements of many regulative factors. In this paper, we design two palindrome sequences which is different in length, construct Cre-loxp combination system, then co-transform two kinds of plasmids, one contains cre gene, the other contains loxp site to E. coli DH5a strain. We judge the expression degree of cre gene in E. coli by examining the changes of plasmid maps of co-transformed strains, then conclude that 20 bp or shorter than 20 bp palindrome sequence uninhibit the expression of downstream genes, however, 34 bp or longer than 34 bp palindrome sequence can inhibit that.

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Year:  2002        PMID: 12557395

Source DB:  PubMed          Journal:  Wei Sheng Wu Xue Bao        ISSN: 0001-6209


  2 in total

1.  Compositional bias is a major determinant of the distribution pattern and abundance of palindromes in Drosophila melanogaster.

Authors:  Guoqing Liu; Jia Liu; Bingjie Zhang
Journal:  J Mol Evol       Date:  2012-11-09       Impact factor: 2.395

2.  A reference catalog of DNA palindromes in the human genome and their variations in 1000 Genomes.

Authors:  Madhavi K Ganapathiraju; Sandeep Subramanian; Srilakshmi Chaparala; Kalyani B Karunakaran
Journal:  Hum Genome Var       Date:  2020-11-20
  2 in total

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