Literature DB >> 12557390

[Cloming, sequence analysis of imidase gene from Alcaligenes eatrophus and its expression in E. coli].

Yu Wang1, Yingzi Zhang, Jiuyuan Ding, Yangjian Liu, Jiang Wang, Zhihua Yu.   

Abstract

A hydantoin-cleaving microorganism 112R4 is screened and identified to be Alcaligenes eutrophus. The resting cell of Alcaligenes eutrophus 112R4 can catalyze the hydrolysis of hydantoin, dihydropyrimidine and succinimide effectively, but not function to 5-monosubstituted hydantoins or 5,5'-disubstituted hydantoins. The microorganism can utilize succinimide as a sole carbon source and nitrogen source, which indicates the presence of a complete transformation pathway of succinimide, and a hydantoin-cleaving enzyme, imidase, is suggested to be contained in this metabolic pathway. A 6 kb EcoRI-EcoRI fragment isolated from the genome DNA of Alcaligenes eutrophus 112R4 is shown to be correlative with the transformation of succinimide. A 2 kb DNA fragment containing the gene of imidase is subcloned and sequenced. Deletion analysis verifies that one open reading frame of 876 nucleotides, which encodes a peptide of 291 amino acids, with a calculated molecular weight of 33688, is responsible for the encoding of imidase. This is the first report of the nucleotide and amino acid sequences of imidase (GenBank accession number: AF373287). A homology search performed in protein database reveals an identity of 14% with polysaccharide deacetylase conserved domain, an identity of 60% with N-terminal 20 amino acids of Blastobacter sp. A17p-4, but no apparent similarity with all known cyclic-amide-cleaving enzymes. This result suggested that the imidase should be classified as a new member of cyclic amidases. Under the control of lac promoter and IPTG induction, the imidase activity of transformed E. coli reached 3200 U/L, which is about 7-fold higher than that of gene donor strain.

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Year:  2002        PMID: 12557390

Source DB:  PubMed          Journal:  Wei Sheng Wu Xue Bao        ISSN: 0001-6209


  3 in total

1.  Gene cloning, expression, and substrate specificity of an imidase from the strain Pseudomonas putida YZ-26.

Authors:  Ya-wei Shi; Li-fang Cui; Jing-ming Yuan
Journal:  Curr Microbiol       Date:  2007-05-28       Impact factor: 2.188

2.  Purine utilization by Klebsiella oxytoca M5al: genes for ring-oxidizing and -opening enzymes.

Authors:  Scott D Pope; Li-Ling Chen; Valley Stewart
Journal:  J Bacteriol       Date:  2008-12-05       Impact factor: 3.490

3.  A survey of orphan enzyme activities.

Authors:  Yannick Pouliot; Peter D Karp
Journal:  BMC Bioinformatics       Date:  2007-07-10       Impact factor: 3.169

  3 in total

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