Literature DB >> 12553908

X-ray structures of Myc-Max and Mad-Max recognizing DNA. Molecular bases of regulation by proto-oncogenic transcription factors.

Satish K Nair1, Stephen K Burley.   

Abstract

X-ray structures of the basic/helix-loop-helix/leucine zipper (bHLHZ) domains of Myc-Max and Mad-Max heterodimers bound to their common DNA target (Enhancer or E box hexanucleotide, 5'-CACGTG-3') have been determined at 1.9 A and 2.0 A resolution, respectively. E box recognition by these two structurally similar transcription factor pairs determines whether a cell will divide and proliferate (Myc-Max) or differentiate and become quiescent (Mad-Max). Deregulation of Myc has been implicated in the development of many human cancers, including Burkitt's lymphoma, neuroblastomas, and small cell lung cancers. Both quasisymmetric heterodimers resemble the symmetric Max homodimer, albeit with marked structural differences in the coiled-coil leucine zipper regions that explain preferential homo- and heteromeric dimerization of these three evolutionarily related DNA-binding proteins. The Myc-Max heterodimer, but not its Mad-Max counterpart, dimerizes to form a bivalent heterotetramer, which explains how Myc can upregulate expression of genes with promoters bearing widely separated E boxes.

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Year:  2003        PMID: 12553908     DOI: 10.1016/s0092-8674(02)01284-9

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  209 in total

1.  Visualization of Myc/Max/Mad family dimers and the competition for dimerization in living cells.

Authors:  Asya V Grinberg; Chang-Deng Hu; Tom K Kerppola
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

2.  Functional analysis of the Mad1-mSin3A repressor-corepressor interaction reveals determinants of specificity, affinity, and transcriptional response.

Authors:  Shaun M Cowley; Richard S Kang; John V Frangioni; Jason J Yada; Alec M DeGrand; Ishwar Radhakrishnan; Robert N Eisenman
Journal:  Mol Cell Biol       Date:  2004-04       Impact factor: 4.272

3.  Convergent evolution of gene networks by single-gene duplications in higher eukaryotes.

Authors:  Gregory D Amoutzias; David L Robertson; Stephen G Oliver; Erich Bornberg-Bauer
Journal:  EMBO Rep       Date:  2004-02-13       Impact factor: 8.807

4.  Algorithm to identify frequent coupled modules from two-layered network series: application to study transcription and splicing coupling.

Authors:  Wenyuan Li; Chao Dai; Chun-Chi Liu; Xianghong Jasmine Zhou
Journal:  J Comput Biol       Date:  2012-06       Impact factor: 1.479

Review 5.  MYC: connecting selective transcriptional control to global RNA production.

Authors:  Theresia R Kress; Arianna Sabò; Bruno Amati
Journal:  Nat Rev Cancer       Date:  2015-09-18       Impact factor: 60.716

6.  Kinetic analysis of the interaction of b/HLH/Z transcription factors Myc, Max, and Mad with cognate DNA.

Authors:  Ozgur Ecevit; Mateen A Khan; Dixie J Goss
Journal:  Biochemistry       Date:  2010-03-30       Impact factor: 3.162

7.  Integrative analysis of many RNA-seq datasets to study alternative splicing.

Authors:  Wenyuan Li; Chao Dai; Shuli Kang; Xianghong Jasmine Zhou
Journal:  Methods       Date:  2014-02-28       Impact factor: 3.608

8.  Prediction of regulatory motifs from human Chip-sequencing data using a deep learning framework.

Authors:  Jinyu Yang; Anjun Ma; Adam D Hoppe; Cankun Wang; Yang Li; Chi Zhang; Yan Wang; Bingqiang Liu; Qin Ma
Journal:  Nucleic Acids Res       Date:  2019-09-05       Impact factor: 16.971

9.  Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA.

Authors:  Zixi Wang; Yaling Wu; Lanfen Li; Xiao-Dong Su
Journal:  Cell Res       Date:  2012-12-11       Impact factor: 25.617

10.  Reengineering natural design by rational design and in vivo library selection: the HLH subdomain in bHLHZ proteins is a unique requirement for DNA-binding function.

Authors:  Jing Xu; Antonia T De Jong; Gang Chen; Hiu-Kwan Chow; Christopher O Damaso; Adrian Schwartz Mittelman; Jumi A Shin
Journal:  Protein Eng Des Sel       Date:  2010-01-19       Impact factor: 1.650

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