Literature DB >> 12541220

Sensitive and efficient detection of RB1 gene mutations enhances care for families with retinoblastoma.

Suzanne Richter1, Kirk Vandezande, Ning Chen, Katherine Zhang, Joanne Sutherland, Julie Anderson, Liping Han, Rachel Panton, Patricia Branco, Brenda Gallie.   

Abstract

Timely molecular diagnosis of RB1 mutations enables earlier treatment, lower risk, and better health outcomes for patients with retinoblastoma; empowers families to make informed family-planning decisions; and costs less than conventional surveillance. However, complexity has hindered clinical implementation of molecular diagnosis. The majority of RB1 mutations are unique and distributed throughout the RB1 gene, with no real hot spots. We devised a sensitive and efficient strategy to identify RB1 mutations that combines quantitative multiplex polymerase chain reaction (QM-PCR), double-exon sequencing, and promoter-targeted methylation-sensitive PCR. Optimization of test order by stochastic dynamic programming and the development of allele-specific PCR for four recurrent point mutations decreased the estimated turnaround time to <3 wk and decreased direct costs by one-third. The multistep method reported here detected 89% (199/224) of mutations in bilaterally affected probands and both mutant alleles in 84% (112/134) of tumors from unilaterally affected probands. For 23 of 27 exons and the promoter region, QM-PCR was a highly accurate measure of deletions and insertions (accuracy 95%). By revealing those family members who did not carry the mutation found in the related proband, molecular analysis enabled 97 at-risk children from 20 representative families to avoid 313 surveillance examinations under anesthetic and 852 clinic visits. The average savings in direct costs from clinical examinations avoided by children in these families substantially exceeded the cost of molecular testing. Moreover, health care savings continue to accrue, as children in succeeding generations avoid unnecessary repeated anaesthetics and examinations.

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Year:  2002        PMID: 12541220      PMCID: PMC379221          DOI: 10.1086/345651

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  58 in total

1.  A PCR test for the detection of hypermethylated alleles at the retinoblastoma locus.

Authors:  M Zeschnigk; D Lohmann; B Horsthemke
Journal:  J Med Genet       Date:  1999-10       Impact factor: 6.318

2.  Color bar coding the BRCA1 gene on combed DNA: a useful strategy for detecting large gene rearrangements.

Authors:  S Gad; A Aurias; N Puget; A Mairal; C Schurra; M Montagna; S Pages; V Caux; S Mazoyer; A Bensimon; D Stoppa-Lyonnet
Journal:  Genes Chromosomes Cancer       Date:  2001-05       Impact factor: 5.006

3.  Conversion of diploidy to haploidy.

Authors:  H Yan; N Papadopoulos; G Marra; C Perrera; J Jiricny; C R Boland; H T Lynch; R B Chadwick; A de la Chapelle; K Berg; J R Eshleman; W Yuan; S Markowitz; S J Laken; C Lengauer; K W Kinzler; B Vogelstein
Journal:  Nature       Date:  2000-02-17       Impact factor: 49.962

4.  A novel complex mutation in exon 8 of RB1 in a case of isolated bilateral retinoblastoma.

Authors:  J Alonso; P García-Miguel; J Abelairas; A Pestaña
Journal:  Hum Mutat       Date:  2000-06       Impact factor: 4.878

5.  Hierarchical mutation screening protocol for the BRCA1 gene.

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Journal:  Hum Mutat       Date:  2000-11       Impact factor: 4.878

Review 6.  Breast cancer genetics and managed care. The Kaiser Permanente experience.

Authors:  S E Kutner
Journal:  Cancer       Date:  1999-12-01       Impact factor: 6.860

7.  Siblings of retinoblastoma patients: are we underestimating their risk?

Authors:  J H Smith; T G Murray; L Fulton; J M O'Brien
Journal:  Am J Ophthalmol       Date:  2000-03       Impact factor: 5.258

8.  Presence of human papilloma virus in tumor tissue from children with retinoblastoma: an alternative mechanism for tumor development.

Authors:  M Orjuela; V P Castaneda; C Ridaura; E Lecona; C Leal; D H Abramson; I Orlow; W Gerald; C Cordon-Cardo
Journal:  Clin Cancer Res       Date:  2000-10       Impact factor: 12.531

Review 9.  Retinoblastoma: the disease, gene and protein provide critical leads to understand cancer.

Authors:  D DiCiommo; B L Gallie; R Bremner
Journal:  Semin Cancer Biol       Date:  2000-08       Impact factor: 15.707

10.  [Early diagnosis of retinoblastoma: usefulness of searching for RB1 gene mutations].

Authors:  C Nájera; F Sánchez; E Mateu; F Prieto; M Beneyto
Journal:  Med Clin (Barc)       Date:  2001-03-17       Impact factor: 1.725

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  84 in total

1.  Multiplex PCR/liquid chromatography assay for detection of gene rearrangements: application to RB1 gene.

Authors:  C Dehainault; A Laugé; V Caux-Moncoutier; S Pagès-Berhouet; F Doz; L Desjardins; J Couturier; M Gauthier-Villars; D Stoppa-Lyonnet; C Houdayer
Journal:  Nucleic Acids Res       Date:  2004-10-11       Impact factor: 16.971

2.  The Olivieri debacle: where were the heroes of bioethics?

Authors:  F Baylis
Journal:  J Med Ethics       Date:  2004-02       Impact factor: 2.903

3.  Clinical utility gene card for: retinoblastoma.

Authors:  Dietmar Lohmann; Brenda Gallie; Charlotte Dommering; Marion Gauthier-Villars
Journal:  Eur J Hum Genet       Date:  2010-12-08       Impact factor: 4.246

4.  Medical radiation exposure and risk of retinoblastoma resulting from new germline RB1 mutation.

Authors:  Greta R Bunin; Marc A Felice; William Davidson; Debra L Friedman; Carol L Shields; Andrew Maidment; Michael O'Shea; Kim E Nichols; Ann Leahey; Ira J Dunkel; Rima Jubran; Carlos Rodriguez-Galindo; Mary Lou Schmidt; Joanna L Weinstein; Stewart Goldman; David H Abramson; Matthew W Wilson; Brenda L Gallie; Helen S L Chan; Michael Shapiro; Avital Cnaan; Arupa Ganguly; Anna T Meadows
Journal:  Int J Cancer       Date:  2011-05-15       Impact factor: 7.396

5.  Association Between Genotype and Phenotype in Consecutive Unrelated Individuals With Retinoblastoma.

Authors:  Flore Salviat; Marion Gauthier-Villars; Matthieu Carton; Nathalie Cassoux; Livia Lumbroso-Le Rouic; Catherine Dehainault; Christine Levy; Lisa Golmard; Isabelle Aerts; François Doz; Fidéline Bonnet-Serrano; Stéphanie Hayek; Alexia Savignoni; Dominique Stoppa-Lyonnet; Claude Houdayer
Journal:  JAMA Ophthalmol       Date:  2020-08-01       Impact factor: 7.389

6.  Epigenetic and copy number variation analysis in retinoblastoma by MS-MLPA.

Authors:  Gabriella Livide; Maria Carmela Epistolato; Mariangela Amenduni; Vittoria Disciglio; Annabella Marozza; Maria Antonietta Mencarelli; Paolo Toti; Stefano Lazzi; Theodora Hadjistilianou; Sonia De Francesco; Alfonso D'Ambrosio; Alessandra Renieri; Francesca Ariani
Journal:  Pathol Oncol Res       Date:  2012-01-26       Impact factor: 3.201

7.  Enhanced sensitivity for detection of low-level germline mosaic RB1 mutations in sporadic retinoblastoma cases using deep semiconductor sequencing.

Authors:  Zhao Chen; Kimberly Moran; Jennifer Richards-Yutz; Erik Toorens; Daniel Gerhart; Tapan Ganguly; Carol L Shields; Arupa Ganguly
Journal:  Hum Mutat       Date:  2013-12-20       Impact factor: 4.878

Review 8.  The genomic landscape of retinoblastoma: a review.

Authors:  Brigitte L Thériault; Helen Dimaras; Brenda L Gallie; Timothy W Corson
Journal:  Clin Exp Ophthalmol       Date:  2013-05-22       Impact factor: 4.207

9.  Parental nutrient intake and risk of retinoblastoma resulting from new germline RB1 mutation.

Authors:  Greta R Bunin; Yimei Li; Arupa Ganguly; Anna T Meadows; Marilyn Tseng
Journal:  Cancer Causes Control       Date:  2012-12-08       Impact factor: 2.506

10.  Risk of cataract extraction among adult retinoblastoma survivors.

Authors:  Gabriel Chodick; Ruth A Kleinerman; Marilyn Stovall; David H Abramson; Johanna M Seddon; Susan A Smith; Margaret A Tucker
Journal:  Arch Ophthalmol       Date:  2009-11
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