Literature DB >> 12537478

Carbon-carbon bonds by hydrolytic enzymes.

Cecilia Branneby1, Peter Carlqvist, Anders Magnusson, Karl Hult, Tore Brinck, Per Berglund.   

Abstract

Enzymes are efficient catalysts in synthetic chemistry, and their catalytic activity with unnatural substrates in organic reaction media is an area attracting much attention. Protein engineering has opened the possibility to change the reaction specificity of enzymes and allow for new reactions to take place in their active sites. We have used this strategy on the well-studied active-site scaffold offered by the serine hydrolase Candida antarctica lipase B (CALB, EC 3.1.1.3) to achieve catalytic activity for aldol reactions. The catalytic reaction was studied in detail by means of quantum chemical calculations in model systems. The predictions from the quantum chemical calculations were then challenged by experiments. Consequently, Ser105 in CALB was targeted by site-directed mutagenesis to create enzyme variants lacking the nucleophilic feature of the active site. The experiments clearly showed an increased reaction rate when the aldol reaction was catalyzed by the mutant enzymes as compared to the wild-type lipase. We expect that the new catalytic activity, harbored in the stable protein scaffold of the lipase, will allow aldol additions of substrates, which cannot be reached by traditional aldolases.

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Year:  2003        PMID: 12537478     DOI: 10.1021/ja028056b

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Computational design of a lipase for catalysis of the Diels-Alder reaction.

Authors:  Mats Linder; Anders Hermansson; John Liebeschuetz; Tore Brinck
Journal:  J Mol Model       Date:  2010-06-24       Impact factor: 1.810

2.  Computational design of a Diels-Alderase from a thermophilic esterase: the importance of dynamics.

Authors:  Mats Linder; Adam Johannes Johansson; Tjelvar S G Olsson; John Liebeschuetz; Tore Brinck
Journal:  J Comput Aided Mol Des       Date:  2012-09-16       Impact factor: 3.686

3.  Computational Studies of Candida Antarctica Lipase B to Test Its Capability as a Starting Point To Redesign New Diels-Alderases.

Authors:  Katarzyna Świderek; Vicent Moliner
Journal:  J Phys Chem B       Date:  2015-12-15       Impact factor: 2.991

4.  Rational design of a lipase to accommodate catalysis of Baeyer-Villiger oxidation with hydrogen peroxide.

Authors:  Peter Carlqvist; Robert Eklund; Karl Hult; Tore Brinck
Journal:  J Mol Model       Date:  2003-04-17       Impact factor: 1.810

5.  How the Same Core Catalytic Machinery Catalyzes 17 Different Reactions: the Serine-Histidine-Aspartate Catalytic Triad of α/β-Hydrolase Fold Enzymes.

Authors:  Alissa Rauwerdink; Romas J Kazlauskas
Journal:  ACS Catal       Date:  2015-09-09       Impact factor: 13.084

6.  Tight binding of transition-state analogues to a peptidyl-aminoacyl-L/D-isomerase from frog skin.

Authors:  Verena Gehmayr; Christa Mollay; Lorenz Reith; Norbert Müller; Alexander Jilek
Journal:  Chembiochem       Date:  2011-07-07       Impact factor: 3.164

7.  MuteinDB: the mutein database linking substrates, products and enzymatic reactions directly with genetic variants of enzymes.

Authors:  Andreas Braun; Bettina Halwachs; Martina Geier; Katrin Weinhandl; Michael Guggemos; Jan Marienhagen; Anna J Ruff; Ulrich Schwaneberg; Vincent Rabin; Daniel E Torres Pazmiño; Gerhard G Thallinger; Anton Glieder
Journal:  Database (Oxford)       Date:  2012-06-21       Impact factor: 3.451

Review 8.  Computational tools for rational protein engineering of aldolases.

Authors:  Michael Widmann; Jürgen Pleiss; Anne K Samland
Journal:  Comput Struct Biotechnol J       Date:  2012-11-13       Impact factor: 7.271

9.  Identification of promiscuous ene-reductase activity by mining structural databases using active site constellations.

Authors:  Georg Steinkellner; Christian C Gruber; Tea Pavkov-Keller; Alexandra Binter; Kerstin Steiner; Christoph Winkler; Andrzej Lyskowski; Orsolya Schwamberger; Monika Oberer; Helmut Schwab; Kurt Faber; Peter Macheroux; Karl Gruber
Journal:  Nat Commun       Date:  2014-06-23       Impact factor: 14.919

Review 10.  Engineering aldolases as biocatalysts.

Authors:  Claire L Windle; Marion Müller; Adam Nelson; Alan Berry
Journal:  Curr Opin Chem Biol       Date:  2014-01-04       Impact factor: 8.822

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