Literature DB >> 12530576

HOPE--a new fixing technique enables preservation and extraction of high molecular weight DNA and RNA of > 20 kb from paraffin-embedded tissues. Hepes-Glutamic acid buffer mediated Organic solvent Protection Effect.

Klaus Hermann Wiedorn1, Jürgen Olert, Robin A P Stacy, Torsten Goldmann, Heike Kühl, Jutta Matthus, Ekkehard Vollmer, Alexander Bosse.   

Abstract

The growing number of molecular pathologic tools that are currently available require material with good long term preservation of morphology, nucleic acids, and antigenic structures. However, pathologic investigations of tissues done at a molecular level are often hampered by the fixatives in use. We thus endeavored to design a new fixing system, including subsequent paraffin-embedding and sectioning, that makes complete pathologic analyses possible, with special consideration of immunohistochemistry (IHC), in situ hybridization (ISH), and molecular pathology. The optimized HOPE (Hepes-Glutamic acid buffer mediated Organic solvent Protection Effect) fixing technique allows us to preserve and extract high molecular weight DNA and RNA of > 20 kbp suitable for downstream applications, such as PCR and RT-PCR from HOPE-fixed, paraffin-embedded tissues that are up to 5 years old. This technique will most probably lead to new impacts on molecular pathology.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12530576     DOI: 10.1078/0344-0338-00329

Source DB:  PubMed          Journal:  Pathol Res Pract        ISSN: 0344-0338            Impact factor:   3.250


  12 in total

1.  What's cooking? detection of important biomarkers in HOPE-fixed, paraffin-embedded tissues eliminates the need for antigen retrieval.

Authors:  Torsten Goldmann; Ekkehard Vollmer; Johannes Gerdes
Journal:  Am J Pathol       Date:  2003-12       Impact factor: 4.307

2.  Application of cryo-compatible antibodies to human placenta paraffin sections.

Authors:  Astrid Blaschitz; Martin Gauster; Gottfried Dohr
Journal:  Histochem Cell Biol       Date:  2008-06-18       Impact factor: 4.304

3.  Paraffin embedding contributes to RNA aggregation, reduced RNA yield, and low RNA quality.

Authors:  David L Evers; Junkun He; Yeon Ho Kim; Jeffrey T Mason; Timothy J O'Leary
Journal:  J Mol Diagn       Date:  2011-08-30       Impact factor: 5.568

4.  Proteomics out of the archive: Two-dimensional electrophoresis and mass spectrometry using HOPE-fixed, paraffin-embedded tissues.

Authors:  Daniel Kähler; Christian Alexander; Holger Schultz; Mahdi Abdullah; Detlev Branscheid; Buko Lindner; Peter Zabel; Ekkehard Vollmer; Torsten Goldmann
Journal:  J Histochem Cytochem       Date:  2009-12-07       Impact factor: 2.479

5.  Overexpression of cytosolic, plasma membrane bound and extracellular heat shock protein 70 (Hsp70) in primary glioblastomas.

Authors:  Jun Thorsteinsdottir; Stefan Stangl; Peng Fu; Ketai Guo; Valerie Albrecht; Sabina Eigenbrod; Janina Erl; Mathias Gehrmann; Jörg-Christian Tonn; Gabriele Multhoff; Christian Schichor
Journal:  J Neurooncol       Date:  2017-08-28       Impact factor: 4.130

6.  Assessment of HOPE fixation in vitrectomy specimens in patients with chronic bilateral uveitis (masquerade syndrome).

Authors:  Sarah E Coupland; Alexandra Perez-Canto; Michael Hummel; Harald Stein; Heinrich Heimann
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2005-05-21       Impact factor: 3.117

7.  The tissue is the issue: improved methylome analysis from paraffin-embedded tissues by application of the HOPE technique.

Authors:  Sebastian Marwitz; Julia Kolarova; Martin Reck; Niels Reinmuth; Christian Kugler; Ines Schädlich; Andrea Haake; Peter Zabel; Ekkehard Vollmer; Reiner Siebert; Torsten Goldmann; Ole Ammerpohl
Journal:  Lab Invest       Date:  2014-06-16       Impact factor: 5.662

8.  Systematic comparison of tissue fixation with alternative fixatives to conventional tissue fixation with buffered formalin in a xenograft-based model.

Authors:  Thorben Nietner; Tiantom Jarutat; Alfred Mertens
Journal:  Virchows Arch       Date:  2012-07-20       Impact factor: 4.064

9.  The HOPE fixation technique--a promising alternative to common prostate cancer biobanking approaches.

Authors:  Martin Braun; Roopika Menon; Pavel Nikolov; Robert Kirsten; Karen Petersen; David Schilling; Christina Schott; Sibylle Gündisch; Falko Fend; Karl-Friedrich Becker; Sven Perner
Journal:  BMC Cancer       Date:  2011-12-07       Impact factor: 4.430

10.  Enhanced molecular analyses by combination of the HOPE-technique and laser microdissection.

Authors:  Torsten Goldmann; Renate Burgemeister; Ulrich Sauer; Siegfried Loeschke; Dagmar Silvia Lang; Detlev Branscheid; Peter Zabel; Ekkehard Vollmer
Journal:  Diagn Pathol       Date:  2006-03-31       Impact factor: 2.644

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.