Literature DB >> 12529394

Nuclear factor 1 is required for both hormone-dependent chromatin remodeling and transcriptional activation of the mouse mammary tumor virus promoter.

Pratibha B Hebbar1, Trevor K Archer.   

Abstract

The mouse mammary tumor virus (MMTV) promoter has been used as a model to study how the glucocorticoid receptor (GR) remodels chromatin to allow other transcription factors to bind and activate transcription. To dissect the precise role of nuclear factor 1 (NF1) in chromatin remodeling and transcriptional activation, we used linker-scanning mutants of transcription factor binding sites on the MMTV promoter. We compared the NF1 mutant MMTV promoter in the context of transiently transfected templates (transient transfection) and templates organized as chromatin (stable transfection) to understand the effect of chromatin on factor binding and transcription. We show that on a transiently transfected template, mutation in the NF1 binding site reduces both basal and hormone-dependent transcription. This suggests that NF1 is required for transcription in the absence of organized chromatin. We also found that binding of NF1 on a transiently transfected template is independent of mutation in hormone response elements or the octamer transcription factor (OTF) binding site. In contrast, the binding of OTF proteins to a transiently transfected template was found to be dependent on the binding of NF1, which may imply that NF1 has a stabilizing effect on OTF binding. On a chromatin template, mutation in the NF1 binding site does not affect the positioning of nucleosomes on the promoter. We also show that in the absence of NF1 binding, GR-mediated chromatin remodeling of nucleosome B is reduced and hormone-dependent activation of transcription is abolished. Further, we demonstrate that NF1 is required for both the association of BRG1 chromatin remodeling complex and the GR on the promoter in vivo. These results suggest the novel possibility that NF1 may participate in chromatin remodeling activities in addition to directly enhancing transcription and that in the absence of its binding site the GR is unable to effectively bind the promoter and recruit the remodeling complex.

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Year:  2003        PMID: 12529394      PMCID: PMC140717          DOI: 10.1128/MCB.23.3.887-898.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  56 in total

Review 1.  Review: chromatin structural features and targets that regulate transcription.

Authors:  A P Wolffe; D Guschin
Journal:  J Struct Biol       Date:  2000-04       Impact factor: 2.867

2.  The glucocorticoid receptor: rapid exchange with regulatory sites in living cells.

Authors:  J G McNally; W G Müller; D Walker; R Wolford; G L Hager
Journal:  Science       Date:  2000-02-18       Impact factor: 47.728

3.  The histone-interacting domain of nuclear factor I activates simian virus 40 DNA replication in vivo.

Authors:  K Müller; N Mermod
Journal:  J Biol Chem       Date:  2000-01-21       Impact factor: 5.157

Review 4.  Understanding nuclear receptor function: from DNA to chromatin to the interphase nucleus.

Authors:  G L Hager
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2001

Review 5.  Analyzing the contributions of chromatin structure in nuclear hormone receptor activated transcription in vivo.

Authors:  C J Fryer; T K Archer
Journal:  Methods Mol Biol       Date:  2001

6.  Glucocorticoid receptor activation of the I kappa B alpha promoter within chromatin.

Authors:  B J Deroo; T K Archer
Journal:  Mol Biol Cell       Date:  2001-11       Impact factor: 4.138

7.  Regulation of CSF1 promoter by the SWI/SNF-like BAF complex.

Authors:  R Liu; H Liu; X Chen; M Kirby; P O Brown; K Zhao
Journal:  Cell       Date:  2001-08-10       Impact factor: 41.582

8.  Dynamics of gene targeting and chromatin remodelling by nuclear receptors.

Authors:  G L Hager; T M Fletcher; N Xiao; C T Baumann; W G Müller; J G McNally
Journal:  Biochem Soc Trans       Date:  2000       Impact factor: 5.407

9.  The mouse mammary tumor virus promoter adopts distinct chromatin structures in human breast cancer cells with and without glucocorticoid receptor.

Authors:  H K Kinyamu; C J Fryer; K B Horwitz; T K Archer
Journal:  J Biol Chem       Date:  2000-06-30       Impact factor: 5.157

10.  Nucleosome positioning on the MMTV LTR results from the frequency-biased occupancy of multiple frames.

Authors:  G Fragoso; S John; M S Roberts; G L Hager
Journal:  Genes Dev       Date:  1995-08-01       Impact factor: 11.361

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  23 in total

1.  Murine endogenous retroviruses and their transcriptional potentials.

Authors:  Jerry Boonyaratanakornkit; Alex Chew; Dewey D Y Ryu; David G Greenhalgh; Kiho Cho
Journal:  Mamm Genome       Date:  2004-11       Impact factor: 2.957

2.  Chromatin-dependent cooperativity between site-specific transcription factors in vivo.

Authors:  Pratibha B Hebbar; Trevor K Archer
Journal:  J Biol Chem       Date:  2006-12-23       Impact factor: 5.157

3.  Systematic dissection of genomic features determining transcription factor binding and enhancer function.

Authors:  Sharon R Grossman; Xiaolan Zhang; Li Wang; Jesse Engreitz; Alexandre Melnikov; Peter Rogov; Ryan Tewhey; Alina Isakova; Bart Deplancke; Bradley E Bernstein; Tarjei S Mikkelsen; Eric S Lander
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-30       Impact factor: 11.205

Review 4.  Chromatin remodeling during glucocorticoid receptor regulated transactivation.

Authors:  Heather A King; Kevin W Trotter; Trevor K Archer
Journal:  Biochim Biophys Acta       Date:  2012-03-06

5.  Epigenetic regulation of 11 beta-hydroxysteroid dehydrogenase type 2 expression.

Authors:  Rasoul Alikhani-Koopaei; Fatemeh Fouladkou; Felix J Frey; Brigitte M Frey
Journal:  J Clin Invest       Date:  2004-10       Impact factor: 14.808

6.  Altered histone H1 stoichiometry and an absence of nucleosome positioning on transfected DNA.

Authors:  Pratibha B Hebbar; Trevor K Archer
Journal:  J Biol Chem       Date:  2007-12-22       Impact factor: 5.157

7.  Phylogenetic footprinting reveals evolutionarily conserved regions of the gonadotropin-releasing hormone gene that enhance cell-specific expression.

Authors:  Marjory L Givens; Reiko Kurotani; Naama Rave-Harel; Nichol L G Miller; Pamela L Mellon
Journal:  Mol Endocrinol       Date:  2004-08-19

8.  Nuclear factor 1 synergizes with progesterone receptor on the mouse mammary tumor virus promoter wrapped around a histone H3/H4 tetramer by facilitating access to the central hormone-responsive elements.

Authors:  Guillermo Pablo Vicent; Roser Zaurin; A Silvina Nacht; Jofre Font-Mateu; Francois Le Dily; Miguel Beato
Journal:  J Biol Chem       Date:  2009-11-24       Impact factor: 5.157

Review 9.  Chromatin remodeling by nuclear receptors.

Authors:  Pratibha B Hebbar; Trevor K Archer
Journal:  Chromosoma       Date:  2003-02-26       Impact factor: 4.316

10.  Two chromatin remodeling activities cooperate during activation of hormone responsive promoters.

Authors:  Guillermo Pablo Vicent; Roser Zaurin; A Silvina Nacht; Ang Li; Jofre Font-Mateu; Francois Le Dily; Michiel Vermeulen; Matthias Mann; Miguel Beato
Journal:  PLoS Genet       Date:  2009-07-17       Impact factor: 5.917

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