Literature DB >> 12527211

Comparative study of HP-27 gene promoter activities between the chipmunk and tree squirrel.

Motoharu Ono1, Miho Kojima-Kawagoe, Noriaki Kondo, Tadayoshi Shiba, Nobuhiko Takamatsu.   

Abstract

The chipmunk hibernation-specific protein HP-27 is a component of the 140-kDa complex that decreases in the blood during hibernation. Although the HP-27 gene is detected in both the chipmunk, a hibernating species of the squirrel family, and the tree squirrel, a nonhibernating species, it is expressed only in the chipmunk, in a liver-specific manner. To understand the difference in HP-27 gene expression between the chipmunk and tree squirrel, we isolated chipmunk and tree squirrel HP-27 genomic clones, and compared their promoter activities. Transient transfection studies in HepG2 cells revealed that the 170 bp 5'-flanking sequence of the chipmunk HP-27 gene was sufficient for liver-specific promoter activity and that deletion of the sequence from -170 to -140 reduced the promoter activity by 90%. Although the corresponding 170 bp 5'-flanking sequence of the tree squirrel HP-27 gene had 89% nucleotide sequence homology to that of the chipmunk, it showed almost no promoter activity in HepG2 cells. In a gel retardation assay using HepG2 or chipmunk liver nuclear extracts, the 5'-flanking sequence of the chipmunk HP-27 gene from -170 to -140 showed a shifted band, but the corresponding tree squirrel sequence did not. Taken together, these data indicate that a transcription factor that binds to this 5'-flanking sequence of the chipmunk HP-27 gene plays an important role in HP-27 gene expression, and the failure of this factor to bind in the case of the tree squirrel HP-27 gene could be responsible for this animal's lack of HP-27 gene expression.

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Year:  2003        PMID: 12527211     DOI: 10.1016/s0378-1119(02)01152-6

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  2 in total

1.  CpG methylation at the USF-binding site is important for the liver-specific transcription of the chipmunk HP-27 gene.

Authors:  Gen Fujii; Yuki Nakamura; Daisuke Tsukamoto; Michihiko Ito; Tadayoshi Shiba; Nobuhiko Takamatsu
Journal:  Biochem J       Date:  2006-04-01       Impact factor: 3.857

2.  Seasonal oscillation of liver-derived hibernation protein complex in the central nervous system of non-hibernating mammals.

Authors:  Marcus M Seldin; Mardi S Byerly; Pia S Petersen; Roy Swanson; Anne Balkema-Buschmann; Martin H Groschup; G William Wong
Journal:  J Exp Biol       Date:  2014-08-01       Impact factor: 3.312

  2 in total

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