Literature DB >> 12524520

The Gam protein of bacteriophage Mu is an orthologue of eukaryotic Ku.

Fabrizio d'Adda di Fagagna1, Geoffrey R Weller, Aidan J Doherty, Stephen P Jackson.   

Abstract

Mu bacteriophage inserts its DNA into the genome of host bacteria and is used as a model for DNA transposition events in other systems. The eukaryotic Ku protein has key roles in DNA repair and in certain transposition events. Here we show that the Gam protein of phage Mu is conserved in bacteria, has sequence homology with both subunits of Ku, and has the potential to adopt a similar architecture to the core DNA-binding region of Ku. Through biochemical studies, we demonstrate that Gam and the related protein of Haemophilus influenzae display DNA binding characteristics remarkably similar to those of human Ku. In addition, we show that Gam can interfere with Ty1 retrotransposition in Saccharomyces cerevisiae. These data reveal structural and functional parallels between bacteriophage Gam and eukaryotic Ku and suggest that their functions have been evolutionarily conserved.

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Year:  2003        PMID: 12524520      PMCID: PMC1315809          DOI: 10.1038/sj.embor.embor709

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  25 in total

Review 1.  DNA repair: how Ku makes ends meet.

Authors:  A J Doherty; S P Jackson
Journal:  Curr Biol       Date:  2001-11-13       Impact factor: 10.834

2.  Identification of bacterial homologues of the Ku DNA repair proteins.

Authors:  A J Doherty; S P Jackson; G R Weller
Journal:  FEBS Lett       Date:  2001-07-06       Impact factor: 4.124

3.  Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair.

Authors:  J R Walker; R A Corpina; J Goldberg
Journal:  Nature       Date:  2001-08-09       Impact factor: 49.962

4.  Role of the non-homologous DNA end joining pathway in the early steps of retroviral infection.

Authors:  L Li; J M Olvera; K E Yoder; R S Mitchell; S L Butler; M Lieber; S L Martin; F D Bushman
Journal:  EMBO J       Date:  2001-06-15       Impact factor: 11.598

5.  Identification of a DNA nonhomologous end-joining complex in bacteria.

Authors:  Geoffrey R Weller; Boris Kysela; Rajat Roy; Louise M Tonkin; Elizabeth Scanlan; Marina Della; Susanne Krogh Devine; Jonathan P Day; Adam Wilkinson; Fabrizio d'Adda di Fagagna; Kevin M Devine; Richard P Bowater; Penny A Jeggo; Stephen P Jackson; Aidan J Doherty
Journal:  Science       Date:  2002-09-06       Impact factor: 47.728

6.  Involvement of DNA end-binding protein Ku in Ty element retrotransposition.

Authors:  J A Downs; S P Jackson
Journal:  Mol Cell Biol       Date:  1999-09       Impact factor: 4.272

7.  Mapping and properties of the gam and sot genes of phage mu: their possible roles in recombination.

Authors:  J Akroyd; B Barton; P Lund; S Maynard Smith; K Sultana; N Symonds
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1984

8.  Prokaryotic homologs of the eukaryotic DNA-end-binding protein Ku, novel domains in the Ku protein and prediction of a prokaryotic double-strand break repair system.

Authors:  L Aravind; E V Koonin
Journal:  Genome Res       Date:  2001-08       Impact factor: 9.043

9.  Chromosome of the enterohemorrhagic Escherichia coli O157:H7; comparative analysis with K-12 MG1655 revealed the acquisition of a large amount of foreign DNAs.

Authors:  M Ohnishi; C Tanaka; S Kuhara; K Ishii; M Hattori; K Kurokawa; T Yasunaga; K Makino; H Shinagawa; T Murata; K Nakayama; Y Terawaki; T Hayashi
Journal:  DNA Res       Date:  1999-12-31       Impact factor: 4.458

10.  Bacteriophage Mu DNA replication is stimulated by non-essential early functions.

Authors:  T Goosen; M Giphart-Gassler; P Van de Putte
Journal:  Mol Gen Genet       Date:  1982
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  28 in total

Review 1.  Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion.

Authors:  Harald Brüssow; Carlos Canchaya; Wolf-Dietrich Hardt
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

2.  DNA repair by the cryptic endonuclease activity of Mu transposase.

Authors:  Wonyoung Choi; Rasika M Harshey
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-18       Impact factor: 11.205

3.  The pathways and outcomes of mycobacterial NHEJ depend on the structure of the broken DNA ends.

Authors:  Jideofor Aniukwu; Michael S Glickman; Stewart Shuman
Journal:  Genes Dev       Date:  2008-02-15       Impact factor: 11.361

Review 4.  Mechanistic flexibility as a conserved theme across 3 billion years of nonhomologous DNA end-joining.

Authors:  Jiafeng Gu; Michael R Lieber
Journal:  Genes Dev       Date:  2008-02-15       Impact factor: 11.361

5.  Fluorescent fusions of the N protein of phage Mu label DNA damage in living cells.

Authors:  Matthew V Kotlajich; Jun Xia; Yin Zhai; Hsin-Yu Lin; Catherine C Bradley; Xi Shen; Qian Mei; Anthony Z Wang; Erica J Lynn; Chandan Shee; Li-Tzu Chen; Lei Li; Kyle M Miller; Christophe Herman; P J Hastings; Susan M Rosenberg
Journal:  DNA Repair (Amst)       Date:  2018-09-14

Review 6.  Bacterial Vivisection: How Fluorescence-Based Imaging Techniques Shed a Light on the Inner Workings of Bacteria.

Authors:  Alexander Cambré; Abram Aertsen
Journal:  Microbiol Mol Biol Rev       Date:  2020-10-28       Impact factor: 11.056

7.  BE-PLUS: a new base editing tool with broadened editing window and enhanced fidelity.

Authors:  Wen Jiang; Songjie Feng; Shisheng Huang; Wenxia Yu; Guanglei Li; Guang Yang; Yajing Liu; Yu Zhang; Lei Zhang; Yu Hou; Jia Chen; Jieping Chen; Xingxu Huang
Journal:  Cell Res       Date:  2018-06-06       Impact factor: 25.617

8.  Phage Mu Gam protein promotes NHEJ in concert with Escherichia coli ligase.

Authors:  Sudipta Bhattacharyya; Michael M Soniat; David Walker; Sooin Jang; Ilya J Finkelstein; Rasika M Harshey
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-28       Impact factor: 11.205

9.  Regulation of telomere length and suppression of genomic instability in human somatic cells by Ku86.

Authors:  Kyungjae Myung; Goutam Ghosh; Farjana J Fattah; Gang Li; Haeyoung Kim; Amalia Dutia; Evgenia Pak; Stephanie Smith; Eric A Hendrickson
Journal:  Mol Cell Biol       Date:  2004-06       Impact factor: 4.272

10.  Genome of Enterobacteriophage Lula/phi80 and insights into its ability to spread in the laboratory environment.

Authors:  Ella Rotman; Elena Kouzminova; Guy Plunkett; Andrei Kuzminov
Journal:  J Bacteriol       Date:  2012-10-05       Impact factor: 3.490

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