Literature DB >> 12514064

Formyltetrahydrofolate synthetase sequences from salt marsh plant roots reveal a diversity of acetogenic bacteria and other bacterial functional groups.

A B Leaphart1, M J Friez, C R Lovell.   

Abstract

Sixty-two partial formyltetrahydrofolate synthetase (FTHFS) structural gene sequences were recovered from roots of salt marsh plants, including Spartina alterniflora, Salicornia virginica, and Juncus roemerianus. Only S. alterniflora roots yielded sequences grouping with FTHFS sequences from known acetogens. Most other FTHFS or FTHFS-like sequences grouped with those from sulfate-reducing bacteria. Several sequences that grouped with Sphingomonas paucimobilis ligH were also recovered.

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Year:  2003        PMID: 12514064      PMCID: PMC152474          DOI: 10.1128/AEM.69.1.693-696.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  16 in total

1.  The crystal structure of N(10)-formyltetrahydrofolate synthetase from Moorella thermoacetica.

Authors:  R Radfar; R Shin; G M Sheldrick; W Minor; C R Lovell; J D Odom; R B Dunlap; L Lebioda
Journal:  Biochemistry       Date:  2000-04-11       Impact factor: 3.162

2.  Molecular phylogenetic and biogeochemical studies of sulfate-reducing bacteria in the rhizosphere of spartina alterniflora

Authors: 
Journal:  Appl Environ Microbiol       Date:  1999-05       Impact factor: 4.792

3.  Seasonal changes in the relative abundance of uncultivated sulfate-reducing bacteria in a salt marsh sediment and in the rhizosphere of Spartina alterniflora.

Authors:  J N Rooney-Varga; R Devereux; R S Evans; M E Hines
Journal:  Appl Environ Microbiol       Date:  1997-10       Impact factor: 4.792

Review 4.  Physiology and ecology of the sulphate-reducing bacteria.

Authors:  G R Gibson
Journal:  J Appl Bacteriol       Date:  1990-12

Review 5.  Acetogenic bacteria: what are the in situ consequences of their diverse metabolic versatilities?

Authors:  H L Drake; S L Daniel; K Küsel; C Matthies; C Kuhner; S Braus-Stromeyer
Journal:  Biofactors       Date:  1997       Impact factor: 6.113

6.  Acetogenic and sulfate-reducing bacteria inhabiting the rhizoplane and deep cortex cells of the sea grass Halodule wrightii.

Authors:  K Küsel; H C Pinkart; H L Drake; R Devereux
Journal:  Appl Environ Microbiol       Date:  1999-11       Impact factor: 4.792

7.  Primary structure of the thermostable formyltetrahydrofolate synthetase from Clostridium thermoaceticum.

Authors:  C R Lovell; A Przybyla; L G Ljungdahl
Journal:  Biochemistry       Date:  1990-06-19       Impact factor: 3.162

8.  Molecular analysis of diazotroph diversity in the rhizosphere of the smooth cordgrass, Spartina alterniflora.

Authors:  C R Lovell; Y M Piceno; J M Quattro; C E Bagwell
Journal:  Appl Environ Microbiol       Date:  2000-09       Impact factor: 4.792

9.  Cloning and sequencing of the Sphingomonas (Pseudomonas) paucimobilis gene essential for the O demethylation of vanillate and syringate.

Authors:  S Nishikawa; T Sonoki; T Kasahara; T Obi; S Kubota; S Kawai; N Morohoshi; Y Katayama
Journal:  Appl Environ Microbiol       Date:  1998-03       Impact factor: 4.792

10.  Relationship between nitrogen-fixing sulfate reducers and fermenters in salt marsh sediments and roots of Spartina alterniflora.

Authors:  E L Gandy; D C Yoch
Journal:  Appl Environ Microbiol       Date:  1988-08       Impact factor: 4.792

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  9 in total

1.  Carbon isotope fractionation of 11 acetogenic strains grown on H2 and CO2.

Authors:  Martin B Blaser; Lisa K Dreisbach; Ralf Conrad
Journal:  Appl Environ Microbiol       Date:  2012-12-28       Impact factor: 4.792

2.  Presence of novel, potentially homoacetogenic bacteria in the rumen as determined by analysis of formyltetrahydrofolate synthetase sequences from ruminants.

Authors:  Gemma Henderson; Graham E Naylor; Sinead C Leahy; Peter H Janssen
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

3.  Distinctive responses of metabolically active microbiota to acidification in a thermophilic anaerobic digester.

Authors:  Masateru Akuzawa; Tomoyuki Hori; Shin Haruta; Yoshiyuki Ueno; Masaharu Ishii; Yasuo Igarashi
Journal:  Microb Ecol       Date:  2011-01-15       Impact factor: 4.552

4.  AcetoBase Version 2: a database update and re-analysis of formyltetrahydrofolate synthetase amplicon sequencing data from anaerobic digesters.

Authors:  Abhijeet Singh; Anna Schnürer
Journal:  Database (Oxford)       Date:  2022-06-16       Impact factor: 4.462

5.  First insights into the syntrophic acetate-oxidizing bacteria--a genetic study.

Authors:  Bettina Müller; Li Sun; Anna Schnürer
Journal:  Microbiologyopen       Date:  2012-12-13       Impact factor: 3.139

6.  Bacterial community composition and fhs profiles of low- and high-ammonia biogas digesters reveal novel syntrophic acetate-oxidising bacteria.

Authors:  Bettina Müller; Li Sun; Maria Westerholm; Anna Schnürer
Journal:  Biotechnol Biofuels       Date:  2016-02-27       Impact factor: 6.040

7.  The root zone of graminoids: A niche for H2-consuming acetogens in a minerotrophic peatland.

Authors:  Anja B Meier; Sindy Oppermann; Harold L Drake; Oliver Schmidt
Journal:  Front Microbiol       Date:  2022-08-05       Impact factor: 6.064

8.  Reductive acetogens isolated from ruminants and their effect on in vitro methane mitigation and milk performance in Holstein cows.

Authors:  Seon-Ho Kim; Lovelia L Mamuad; Mahfuzul Islam; Sang-Suk Lee
Journal:  J Anim Sci Technol       Date:  2020-01-31

9.  AcetoBase: a functional gene repository and database for formyltetrahydrofolate synthetase sequences.

Authors:  Abhijeet Singh; Bettina Müller; Hans-Henrik Fuxelius; Anna Schnürer
Journal:  Database (Oxford)       Date:  2019-01-01       Impact factor: 3.451

  9 in total

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