Literature DB >> 12507960

Quantitative real-time PCR method for detection of B-lymphocyte monoclonality by comparison of kappa and lambda immunoglobulin light chain expression.

Anders Ståhlberg1, Pierre Aman, Börje Ridell, Petter Mostad, Mikael Kubista.   

Abstract

BACKGROUND: An abnormal IgLkappa:IgLlambda ratio has long been used as a clinical criterion for non-Hodgkin B-cell lymphomas. As a first step toward a quantitative real-time PCR-based multimarker diagnostic analysis of lymphomas, we have developed a method for determination of IgLkappa:IgLlambda ratio in clinical samples.
METHODS: Light-up probe-based real-time PCR was used to quantify IgLkappa and IgLlambda cDNA from 32 clinical samples. The samples were also investigated by routine immunohistochemical analysis and flow cytometry.
RESULTS: Of 32 suspected non-Hodgkin lymphoma samples analyzed, 28 were correctly assigned from real-time PCR measurements assuming invariant PCR efficiencies in the biological samples. Four samples were false negatives. One was a T-cell lymphoma, one was a diffuse large B-cell lymphoma, and one was reanalyzed and found lymphoma-positive by in situ calibration, which takes into account sample-specific PCR inhibition. Twelve of the samples were fine-needle aspirates, and these were all correctly assigned.
CONCLUSIONS: This work is a first step toward analyzing clinical samples by quantitative light-up probe-based real-time PCR. Quantitative real-time PCR appears suitable for high-throughput testing of cancers by measuring expression of tumor markers in fine-needle aspirates.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12507960     DOI: 10.1373/49.1.51

Source DB:  PubMed          Journal:  Clin Chem        ISSN: 0009-9147            Impact factor:   8.327


  34 in total

1.  Kinetic Outlier Detection (KOD) in real-time PCR.

Authors:  Tzachi Bar; Anders Ståhlberg; Anders Muszta; Mikael Kubista
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

2.  Sigmoidal curve-fitting redefines quantitative real-time PCR with the prospective of developing automated high-throughput applications.

Authors:  R G Rutledge
Journal:  Nucleic Acids Res       Date:  2004-12-15       Impact factor: 16.971

3.  Comprehensive algorithm for quantitative real-time polymerase chain reaction.

Authors:  Sheng Zhao; Russell D Fernald
Journal:  J Comput Biol       Date:  2005-10       Impact factor: 1.479

Review 4.  Quantitative real-time RT-PCR data analysis: current concepts and the novel "gene expression's CT difference" formula.

Authors:  Jan H Schefe; Kerstin E Lehmann; Ivo R Buschmann; Thomas Unger; Heiko Funke-Kaiser
Journal:  J Mol Med (Berl)       Date:  2006-09-14       Impact factor: 4.599

5.  Real-time PCR detection of protein analytes with conformation-switching aptamers.

Authors:  Litao Yang; Andrew D Ellington
Journal:  Anal Biochem       Date:  2008-05-20       Impact factor: 3.365

6.  Characterization of purinergic P2X4 receptor channels expressed in anterior pituitary cells.

Authors:  Hana Zemkova; Marek Kucka; Shuo Li; Arturo E Gonzalez-Iglesias; Melanija Tomic; Stanko S Stojilkovic
Journal:  Am J Physiol Endocrinol Metab       Date:  2009-12-15       Impact factor: 4.310

7.  Quantification of cell proliferation and alpha-toxin gene expression of Clostridium perfringens in the development of necrotic enteritis in broiler chickens.

Authors:  Weiduo Si; Joshua Gong; Yanming Han; Hai Yu; John Brennan; Huaijun Zhou; Shu Chen
Journal:  Appl Environ Microbiol       Date:  2007-09-07       Impact factor: 4.792

8.  Assessing the performance capabilities of LRE-based assays for absolute quantitative real-time PCR.

Authors:  Robert G Rutledge; Don Stewart
Journal:  PLoS One       Date:  2010-03-17       Impact factor: 3.240

9.  An efficient multistrategy DNA decontamination procedure of PCR reagents for hypersensitive PCR applications.

Authors:  Sophie Champlot; Camille Berthelot; Mélanie Pruvost; E Andrew Bennett; Thierry Grange; Eva-Maria Geigl
Journal:  PLoS One       Date:  2010-09-28       Impact factor: 3.240

10.  Antimalarial exposure delays Plasmodium falciparum intra-erythrocytic cycle and drives drug transporter genes expression.

Authors:  Maria Isabel Veiga; Pedro Eduardo Ferreira; Berit Aydin Schmidt; Ulf Ribacke; Anders Björkman; Ales Tichopad; José Pedro Gil
Journal:  PLoS One       Date:  2010-08-25       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.