Literature DB >> 12507428

Uncoupling of initiation factor eIF5B/IF2 GTPase and translational activities by mutations that lower ribosome affinity.

Byung-Sik Shin1, David Maag, Antonina Roll-Mecak, M Shamsul Arefin, Stephen K Burley, Jon R Lorsch, Thomas E Dever.   

Abstract

Translation initiation factor eIF5B/IF2 is a GTPase that promotes ribosomal subunit joining. We show that eIF5B mutations in Switch I, an element conserved in all GTP binding domains, impair GTP hydrolysis and general translation but not eIF5B subunit joining function. Intragenic suppressors of the Switch I mutation restore general translation, but not eIF5B GTPase activity. These suppressor mutations reduce the ribosome affinity of eIF5B and increase AUG skipping/leaky scanning. The uncoupling of translation and eIF5B GTPase activity suggests a regulatory rather than mechanical function for eIF5B GTP hydrolysis in translation initiation. The translational defect suggests eIF5B stabilizes Met-tRNA(i)(Met) binding and that GTP hydrolysis by eIF5B is a checkpoint monitoring 80S ribosome assembly in the final step of translation initiation.

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Year:  2002        PMID: 12507428     DOI: 10.1016/s0092-8674(02)01171-6

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  57 in total

Review 1.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  The eukaryotic initiation factor (eIF) 4G HEAT domain promotes translation re-initiation in yeast both dependent on and independent of eIF4A mRNA helicase.

Authors:  Ryosuke Watanabe; Marcelo Jun Murai; Chingakham Ranjit Singh; Stephanie Fox; Miki Ii; Katsura Asano
Journal:  J Biol Chem       Date:  2010-05-12       Impact factor: 5.157

3.  eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.

Authors:  Bernhard Kuhle; Ralf Ficner
Journal:  EMBO J       Date:  2014-03-31       Impact factor: 11.598

4.  Expression, purification and ligand binding properties of the recombinant translation initiation factor (PeIF5B) from Pisum sativum.

Authors:  Sheeba Rasheedi; Madhuri Suragani; Soghra K Haq; Rajesh Bhardwaj; Seyed E Hasnain; Nasreen Z Ehtesham
Journal:  Mol Cell Biochem       Date:  2010-10-02       Impact factor: 3.396

5.  Selenocysteine tRNA-specific elongation factor SelB is a structural chimaera of elongation and initiation factors.

Authors:  Marc Leibundgut; Christian Frick; Martin Thanbichler; August Böck; Nenad Ban
Journal:  EMBO J       Date:  2004-12-23       Impact factor: 11.598

6.  Eukaryotic translation initiation factor 5 is critical for integrity of the scanning preinitiation complex and accurate control of GCN4 translation.

Authors:  Chingakham Ranjit Singh; Cynthia Curtis; Yasufumi Yamamoto; Nathan S Hall; Dustin S Kruse; Hui He; Ernest M Hannig; Katsura Asano
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

7.  rRNA suppressor of a eukaryotic translation initiation factor 5B/initiation factor 2 mutant reveals a binding site for translational GTPases on the small ribosomal subunit.

Authors:  Byung-Sik Shin; Joo-Ran Kim; Michael G Acker; Kathryn N Maher; Jon R Lorsch; Thomas E Dever
Journal:  Mol Cell Biol       Date:  2008-11-24       Impact factor: 4.272

8.  Interaction between 25S rRNA A loop and eukaryotic translation initiation factor 5B promotes subunit joining and ensures stringent AUG selection.

Authors:  Hiroyuki Hiraishi; Byung-Sik Shin; Tsuyoshi Udagawa; Naoki Nemoto; Wasimul Chowdhury; Jymie Graham; Christian Cox; Megan Reid; Susan J Brown; Katsura Asano
Journal:  Mol Cell Biol       Date:  2013-07-08       Impact factor: 4.272

Review 9.  Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Authors:  Nahum Sonenberg; Alan G Hinnebusch
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

10.  Interaction of the RNP1 motif in PRT1 with HCR1 promotes 40S binding of eukaryotic initiation factor 3 in yeast.

Authors:  Klaus H Nielsen; Leos Valásek; Caroah Sykes; Antonina Jivotovskaya; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

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