Literature DB >> 12501368

Leifsonia gen. nov., a genus for 2,4-diaminobutyric acid-containing actinomycetes to accommodate "Corynebacterium aquaticum" Leifson 1962 and Clavibacter xyli subsp. cynodontis Davis et al. 1984.

Ken-Ichiro Suzuki1, Masahito Suzuki, Junko Sasaki, Yong-Ha Park, Kazuo Komagata Komagata.   

Abstract

"Corynebacterium aquaticum" was first proposed by Leifson in 1962 but not included in the approved lists of bacterial names in 1980. This species has been left from reclassification of the genus Corynebacterium because of the unusual chemotaxonomic characteristics such as 2,4-diaminobutyric acid (DAB) in the peptidoglycan and menaquinones of MK-10 and MK-11. A close relationship of "C. aquaticum" to the genera Agromyces and Rathayibacter has been pointed out from the viewpoint of chemotaxonomic profiles and phylogeny based on the 16S rDNA sequences. An analysis of DAB isomers of the peptidoglycan distinguished "C. aquaticum" clearly from these genera by possessing both L-DAB and D-DAB. We also found that the type strain of Clavibacter xyli subsp. cynodontis and two strains of amine-decomposing bacteria showed the similar chemotaxonomic features and formed a cluster with "C. aquaticum" in the phylogenetic tree based on 16S rDNA sequences in the family Microbacteriaceae. Considering these results, we propose a new genus Leifsonia to accommodate the four strains. The four species, Leifsonia aquatica sp. nov., nom. rev., comb. nov. (type species, type strain=JCM 1368), Leifsonia shinshuensis sp. nov. (type strain=DB102=JCM 10591), Leifsonia naganoensis sp. nov. (type strain=DB103=JCM 10592), and Leifsonia cynodontis comb. nov. (type strain=JCM 9733=ICMP 8790), were proposed here for the strains.

Entities:  

Year:  1999        PMID: 12501368     DOI: 10.2323/jgam.45.253

Source DB:  PubMed          Journal:  J Gen Appl Microbiol        ISSN: 0022-1260            Impact factor:   1.452


  11 in total

Review 1.  Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.

Authors:  Marco Ventura; Carlos Canchaya; Andreas Tauch; Govind Chandra; Gerald F Fitzgerald; Keith F Chater; Douwe van Sinderen
Journal:  Microbiol Mol Biol Rev       Date:  2007-09       Impact factor: 11.056

2.  Efficient PCR-based amplification of diverse alcohol dehydrogenase genes from metagenomes for improving biocatalysis: screening of gene-specific amplicons from metagenomes.

Authors:  Nobuya Itoh; Satomi Kariya; Junji Kurokawa
Journal:  Appl Environ Microbiol       Date:  2014-08-01       Impact factor: 4.792

3.  Homoserinimonas aerilata gen. nov., sp. nov., a novel member of the family Microbacteriaceae isolated from an air sample in Korea.

Authors:  Soo-Jin Kim; Yun-Hee Jang; Moriyuki Hamada; Tomohiko Tamura; Jae-Hyung Ahn; Hang-Yeon Weon; Ken-Ichiro Suzuki; Soon-Wo Kwon
Journal:  J Microbiol       Date:  2012-07-21       Impact factor: 3.422

4.  Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation.

Authors:  Stephen D Bentley; Craig Corton; Susan E Brown; Andrew Barron; Louise Clark; Jon Doggett; Barbara Harris; Doug Ormond; Michael A Quail; Georgiana May; David Francis; Dennis Knudson; Julian Parkhill; Carol A Ishimaru
Journal:  J Bacteriol       Date:  2008-01-11       Impact factor: 3.490

5.  Leifsonia flava sp. nov., a novel actinobacterium isolated from the rhizosphere of Aquilegia viridiflora.

Authors:  Ying Cai; Wen-Zhen Tao; Yu-Jun Ma; Juan Cheng; Meng-Yue Zhang; Yi-Xuan Zhang
Journal:  J Microbiol       Date:  2018-07-25       Impact factor: 3.422

6.  Diaminobutyricibacter tongyongensis gen. nov., sp. nov. and Homoserinibacter gongjuensis gen. nov., sp. nov. belong to the family Microbacteriaceae.

Authors:  Soo-Jin Kim; Jae-Hyung Ahn; Hang-Yeon Weon; Moriyuki Hamada; Ken-ichiro Suzuki; Soon-Wo Kwon
Journal:  J Microbiol       Date:  2014-02-17       Impact factor: 3.422

7.  Analysis of genes that encode DtxR-like transcriptional regulators in pathogenic and saprophytic corynebacterial species.

Authors:  Diana Marra Oram; Ana Avdalovic; Randall K Holmes
Journal:  Infect Immun       Date:  2004-04       Impact factor: 3.441

8.  Genome Sequences for Multiple Clavibacter Strains from Different Subspecies.

Authors:  Xiang Sean Li; Xiaoli Kat Yuan
Journal:  Genome Announc       Date:  2017-09-21

9.  Draft Genome Sequence of Leifsonia sp. Strain NCR5, a Rhizobacterium Isolated from Cadmium-Contaminated Soil.

Authors:  Eleonora Egidi; Jennifer L Wood; Edward M Fox; Wuxing Liu; Ashley E Franks
Journal:  Genome Announc       Date:  2017-06-08

10.  Characterization of new IS elements and studies of their dispersion in two subspecies of Leifsonia xyli.

Authors:  Marcelo M Zerillo; Marie-Anne Van Sluys; Luis Eduardo A Camargo; Claudia B Monteiro-Vitorello
Journal:  BMC Microbiol       Date:  2008-07-25       Impact factor: 3.605

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