Literature DB >> 1249990

Moments and distribution functions for polypeptide chains. Poly-L-alanine.

J C Conrad, P J Flory.   

Abstract

Statistical mechanical averages of vectors and tensors characterizing the configurations of polypeptides have been calculated for poly-L-alanines (PLA) of xu = 2-400 peptide units. These quantities are expressed in the reference frame of the first peptide unit, the X axis being situated along the virtual bond, the Y axis in the plane of the peptide unit. The persistence vector a identical to (r) converges rapidly with chain length to its limit a infinity which lies virtually in the XZ plane. Configurational averages of Cartesian tensors up to the sixth rank formed from the displacement vector p = r-a have been computed. For xu greater than 50 the even moments of fourth and sixth rank formed from the reduced vector p for the real chain are well repreented by the freely jointed chain with 21.7 virtual bonds equivalent to one of the model. The moments of p display assymmetry for xu less than 50. Density distribution functions Wa(p), evaluated from the three-dimensional Hermite series truncated at the term in the polynomial involving the tensors of p of sixth rank, display no obvious symmetry for xu less than 50. Approximate spherical symmetry of the distribution of p about a is observed only for xu greater than or equal to 100.

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Year:  1976        PMID: 1249990     DOI: 10.1021/ma60049a007

Source DB:  PubMed          Journal:  Macromolecules        ISSN: 0024-9297            Impact factor:   5.985


  2 in total

Review 1.  Are denatured proteins ever random coils?

Authors:  R L Baldwin; B H Zimm
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

2.  Insertion of the cytochrome b5 heme-binding loop into an SH3 domain. Effects on structure and stability, and clues about the cytochrome's architecture.

Authors:  Jane A Knappenberger; Christina M Kraemer-Pecore; Juliette T J Lecomte
Journal:  Protein Sci       Date:  2004-09-30       Impact factor: 6.725

  2 in total

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