Literature DB >> 12496115

Pressure dependence of the photocycle kinetics of bacteriorhodopsin.

B U Klink1, R Winter, M Engelhard, I Chizhov.   

Abstract

The pressure dependence of the photocycle kinetics of bacteriorhodopsin from Halobacterium salinarium was investigated at pressures up to 4 kbar at 25 degrees C and 40 degrees C. The kinetics can be adequately modeled by nine apparent rate constants, which are assigned to irreversible transitions of a single relaxation chain of nine kinetically distinguishable states P(1) to P(9). All states except P(1) and P(9) consist of two or more spectral components. The kinetic states P(2) to P(6) comprise only the two fast equilibrating spectral states L and M. From the pressure dependence, the volume differences DeltaV(o)(LM) between these two spectral states could be determined that range from DeltaV(o)(LM) = -11.4 +/- 0.7 ml/mol (P(2)) to DeltaV(o)(LM) = 14.6 +/- 2.8 mL/mol (P(6)). A model is developed that explains the dependence of DeltaV(o)(LM) on the kinetic state by the electrostriction effect of charges, which are formed and neutralized during the L/M transition.

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Year:  2002        PMID: 12496115      PMCID: PMC1302423          DOI: 10.1016/S0006-3495(02)75348-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  23 in total

1.  The effect of protein conformation change from alpha(II) to alpha(I) on the bacteriorhodopsin photocycle.

Authors:  J Wang; M A El-Sayed
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  Microsecond exchange of internal water molecules in bacteriorhodopsin.

Authors:  M Gottschalk; N A Dencher; B Halle
Journal:  J Mol Biol       Date:  2001-08-17       Impact factor: 5.469

Review 3.  Chemical and physical evidence for multiple functional steps comprising the M state of the bacteriorhodopsin photocycle.

Authors:  F M Betancourt; R M Glaeser
Journal:  Biochim Biophys Acta       Date:  2000-08-30

Review 4.  Protonation reactions and their coupling in bacteriorhodopsin.

Authors:  S P Balashov
Journal:  Biochim Biophys Acta       Date:  2000-08-30

5.  Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

6.  Rhodopsin-like protein from the purple membrane of Halobacterium halobium.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Nat New Biol       Date:  1971-09-29

7.  Temperature and halide dependence of the photocycle of halorhodopsin from Natronobacterium pharaonis.

Authors:  I Chizhov; M Engelhard
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

8.  pK(a) Calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin.

Authors:  V Z Spassov; H Luecke; K Gerwert; D Bashford
Journal:  J Mol Biol       Date:  2001-09-07       Impact factor: 5.469

9.  Dynamics of the proton transfer reaction on the cytoplasmic surface of bacteriorhodopsin.

Authors:  S Checover; Y Marantz; E Nachliel; M Gutman; M Pfeiffer; J Tittor; D Oesterhelt; N A Dencher
Journal:  Biochemistry       Date:  2001-04-10       Impact factor: 3.162

10.  The photophobic receptor from Natronobacterium pharaonis: temperature and pH dependencies of the photocycle of sensory rhodopsin II.

Authors:  I Chizhov; G Schmies; R Seidel; J R Sydor; B Lüttenberg; M Engelhard
Journal:  Biophys J       Date:  1998-08       Impact factor: 4.033

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  4 in total

1.  The role of small intraprotein cavities in the catalytic cycle of bacteriorhodopsin.

Authors:  Ran Friedman; Esther Nachliel; Menachem Gutman
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

2.  Characterization of the temperature- and pressure-induced inverse and reentrant transition of the minimum elastin-like polypeptide GVG(VPGVG) by DSC, PPC, CD, and FT-IR spectroscopy.

Authors:  C Nicolini; R Ravindra; B Ludolph; R Winter
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

3.  How environment supports a state: molecular dynamics simulations of two states in bacteriorhodopsin suggest lipid and water compensation.

Authors:  Hyunbum Jang; Paul S Crozier; Mark J Stevens; Thomas B Woolf
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

4.  Osmotic stress and viscous retardation of the Na,K-ATPase ion pump.

Authors:  Mikael Esmann; Natalya U Fedosova; Derek Marsh
Journal:  Biophys J       Date:  2007-11-30       Impact factor: 4.033

  4 in total

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