Literature DB >> 12493240

Vertebrate evolution: doubling and shuffling with a full deck.

Dannie Durand1.   

Abstract

The number and role of whole-genome duplications in vertebrate evolution has intrigued evolutionary biologists since Ohno first proposed genome duplication as the force driving the 'big leap' in vertebrate morphological innovation. Attempts to resolve these issues have been thwarted by small and noisy datasets, and by lack of computational accuracy and statistical rigor. Recently, Ken Wolfe and colleagues presented a genome-scale, statistically rigorous analysis of evidence based on the spatial organization of duplicated genes, as well as estimates of duplication times. Their results provide the strongest evidence to date of large-scale duplication throughout the vertebrate genome, consistent with at least one whole-genome duplication.

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Year:  2003        PMID: 12493240     DOI: 10.1016/s0168-9525(02)00008-2

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  8 in total

1.  Evidence that rice and other cereals are ancient aneuploids.

Authors:  Klaas Vandepoele; Cedric Simillion; Yves Van de Peer
Journal:  Plant Cell       Date:  2003-09       Impact factor: 11.277

2.  Nearly identical paralogs: implications for maize (Zea mays L.) genome evolution.

Authors:  Scott J Emrich; Li Li; Tsui-Jung Wen; Marna D Yandeau-Nelson; Yan Fu; Ling Guo; Hui-Hsien Chou; Srinivas Aluru; Daniel A Ashlock; Patrick S Schnable
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

3.  Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates.

Authors:  Yoichiro Nakatani; Hiroyuki Takeda; Yuji Kohara; Shinichi Morishita
Journal:  Genome Res       Date:  2007-07-25       Impact factor: 9.043

Review 4.  Diversification of four human HOX gene clusters by step-wise evolution rather than ancient whole-genome duplications.

Authors:  Amir Ali Abbasi
Journal:  Dev Genes Evol       Date:  2015-10-19       Impact factor: 0.900

5.  Darwinian evolution in the light of genomics.

Authors:  Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2009-02-12       Impact factor: 16.971

6.  Comparative genomics using Fugu reveals insights into regulatory subfunctionalization.

Authors:  Adam Woolfe; Greg Elgar
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

7.  Evolutionary consequences of a large duplication event in Trypanosoma brucei: chromosomes 4 and 8 are partial duplicons.

Authors:  Andrew P Jackson
Journal:  BMC Genomics       Date:  2007-11-23       Impact factor: 3.969

8.  Systematic discovery of linear binding motifs targeting an ancient protein interaction surface on MAP kinases.

Authors:  András Zeke; Tomas Bastys; Anita Alexa; Ágnes Garai; Bálint Mészáros; Klára Kirsch; Zsuzsanna Dosztányi; Olga V Kalinina; Attila Reményi
Journal:  Mol Syst Biol       Date:  2015-11-03       Impact factor: 11.429

  8 in total

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