Literature DB >> 12489434

Nanoelectrospray tandem mass spectrometry and sequence similarity searching for identification of proteins from organisms with unknown genomes.

Anna Shevchenko1, Shamil Sunyaev, Adam Liska, Peer Bork, Andrej Shevchenko.   

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Year:  2003        PMID： 12489434     DOI： 10.1385/1-59259-342-9:221

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


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  16 in total

1.  Roles of replication fork-interacting and Chk1-activating domains from Claspin in a DNA replication checkpoint response.

Authors:  Joon Lee; Daniel A Gold; Anna Shevchenko; Andrej Shevchenko; William G Dunphy
Journal:  Mol Biol Cell       Date:  2005-09-07       Impact factor: 4.138

2.  De novo peptide sequencing and identification with precision mass spectrometry.

Authors:  Ari M Frank; Mikhail M Savitski; Michael L Nielsen; Roman A Zubarev; Pavel A Pevzner
Journal:  J Proteome Res       Date:  2007-01       Impact factor: 4.466

3.  Purification and mass spectrometry identification of microtubule-binding proteins from Xenopus egg extracts.

Authors:  Vincent Gache; Patrice Waridel; Sylvie Luche; Andrej Shevchenko; Andrei V Popov
Journal:  Methods Mol Med       Date:  2007

4.  Separating the wheat from the chaff: unbiased filtering of background tandem mass spectra improves protein identification.

Authors:  Magno Junqueira; Victor Spirin; Tiago Santana Balbuena; Patrice Waridel; Vineeth Surendranath; Grigoriy Kryukov; Ivan Adzhubei; Henrik Thomas; Shamil Sunyaev; Andrej Shevchenko
Journal:  J Proteome Res       Date:  2008-06-18       Impact factor: 4.466

5.  Xenopus meiotic microtubule-associated interactome.

Authors:  Vincent Gache; Patrice Waridel; Christof Winter; Aurelie Juhem; Michael Schroeder; Andrej Shevchenko; Andrei V Popov
Journal:  PLoS One       Date:  2010-02-17       Impact factor: 3.240

6.  Protein identification pipeline for the homology-driven proteomics.

Authors:  Magno Junqueira; Victor Spirin; Tiago Santana Balbuena; Henrik Thomas; Ivan Adzhubei; Shamil Sunyaev; Andrej Shevchenko
Journal:  J Proteomics       Date:  2008-07-12       Impact factor: 4.044

Review 7.  Proteogenomics from a bioinformatics angle: A growing field.

Authors:  Gerben Menschaert; David Fenyö
Journal:  Mass Spectrom Rev       Date:  2015-12-15       Impact factor: 10.946

8.  Characterization and comparison of major urinary proteins from the house mouse, Mus musculus domesticus, and the aboriginal mouse, Mus macedonicus.

Authors:  Duncan H L Robertson; Jane L Hurst; Jeremy B Searle; Islam Gündüz; Robert J Beynon
Journal:  J Chem Ecol       Date:  2007-03       Impact factor: 2.626

9.  Staphylococcus aureus seroproteomes discriminate ruminant isolates causing mild or severe mastitis.

Authors:  Caroline Le Maréchal; Julien Jardin; Gwenaël Jan; Sergine Even; Coralie Pulido; Jean-Michel Guibert; David Hernandez; Patrice François; Jacques Schrenzel; Dieter Demon; Evelyne Meyer; Nadia Berkova; Richard Thiéry; Eric Vautor; Yves Le Loir
Journal:  Vet Res       Date:  2011-02-15       Impact factor: 3.683

10.  Molecular basis of virulence in Staphylococcus aureus mastitis.

Authors:  Caroline Le Maréchal; Nubia Seyffert; Julien Jardin; David Hernandez; Gwenaël Jan; Lucie Rault; Vasco Azevedo; Patrice François; Jacques Schrenzel; Maarten van de Guchte; Sergine Even; Nadia Berkova; Richard Thiéry; J Ross Fitzgerald; Eric Vautor; Yves Le Loir
Journal:  PLoS One       Date:  2011-11-11       Impact factor: 3.240
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