Literature DB >> 12488003

Relationships between the temperature dependence of solvent denaturation and the denaturant dependence of protein stability curves.

Mark E Zweifel1, Doug Barrick.   

Abstract

We have used a simple binding model to consider how the thermodynamics of denaturant-protein interactions might influence the shape of protein stability curves (free energy change as a function of temperature), and how these effects translate into a temperature dependence of the apparent m-value (sensitivity of unfolding free energy to denaturant). We find that for an exothermic binding reaction with no binding heat capacity increment, increasing denaturant concentrations produces an apparent increase in curvature in the protein stability curve, giving rise to an increase in the heat capacity increment of unfolding. Similar increases are seen if the binding heat capacity increment is taken as positive. However, for a negative binding heat capacity increment, increasing denaturant concentrations decreases the curvature of the stability curve, giving rise to a decrease in the heat capacity of unfolding. At very high denaturant concentrations (above which the heat capacity of denaturation becomes negative) the stability curve becomes dimpled, showing two separate maxima rather than one. These three models result in very different temperature dependencies of apparent m-values. For urea-induced unfolding of the ankyrin-domain of the Drosophila Notch protein, we find a dependence of experimental m-values on temperature that is similar to that produced by a negative binding heat capacity increment. This temperature dependence is consistent with the observed decrease in heat capacity of unfolding as denaturant is added. Copyright 2002 Elsevier Science B.V.

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Year:  2002        PMID: 12488003     DOI: 10.1016/s0301-4622(02)00181-3

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  13 in total

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Authors:  Jean-Baptiste Rouget; Martin A Schroer; Christoph Jeworrek; Matthias Pühse; Jean-Louis Saldana; Yannick Bessin; Metin Tolan; Doug Barrick; Roland Winter; Catherine A Royer
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3.  pH dependence thermal stability of a chymotrypsin inhibitor from Schizolobium parahyba seeds.

Authors:  Rozeni C L Teles; Leonardo de A Calderon; Francisco J Medrano; João A R G Barbosa; Beatriz G Guimarães; Marcelo M Santoro; Sonia M de Freitas
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

4.  An extensive thermodynamic characterization of the dimerization domain of the HIV-1 capsid protein.

Authors:  María C Lidón-Moya; Francisco N Barrera; Marta Bueno; Raúl Pérez-Jiménez; Javier Sancho; Mauricio G Mateu; José L Neira
Journal:  Protein Sci       Date:  2005-09       Impact factor: 6.725

5.  Molten globule and native state ensemble of Helicobacter pylori flavodoxin: can crowding, osmolytes or cofactors stabilize the native conformation relative to the molten globule?

Authors:  N Cremades; J Sancho
Journal:  Biophys J       Date:  2008-04-25       Impact factor: 4.033

6.  Exploring the Denatured State Ensemble by Single-Molecule Chemo-Mechanical Unfolding: The Effect of Force, Temperature, and Urea.

Authors:  Emily J Guinn; Susan Marqusee
Journal:  J Mol Biol       Date:  2017-08-04       Impact factor: 5.469

7.  Thermodynamics of the Trp-cage miniprotein unfolding in urea.

Authors:  Lucas N R Wafer; Werner W Streicher; George I Makhatadze
Journal:  Proteins       Date:  2010-05-01

8.  Thermodynamic characterization of monomeric and dimeric forms of CcdB (controller of cell division or death B protein).

Authors:  Kanika Bajaj; Ghadiyaram Chakshusmathi; Kiran Bachhawat-Sikder; Avadhesha Surolia; Raghavan Varadarajan
Journal:  Biochem J       Date:  2004-06-01       Impact factor: 3.857

9.  Urea-temperature phase diagrams capture the thermodynamics of denatured state expansion that accompany protein unfolding.

Authors:  Alexander Tischer; Matthew Auton
Journal:  Protein Sci       Date:  2013-07-25       Impact factor: 6.725

10.  "Cooperative collapse" of the denatured state revealed through Clausius-Clapeyron analysis of protein denaturation phase diagrams.

Authors:  Alexander Tischer; Venkata R Machha; Jörg Rösgen; Matthew Auton
Journal:  Biopolymers       Date:  2018-02-19       Impact factor: 2.505

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