Literature DB >> 12486457

Thermal stability of aminoacyl-tRNAs in aqueous solutions.

Victor G Stepanov1, Jens Nyborg.   

Abstract

Life in hot environments poses certain constraints on the metabolism of thermophilic organisms. Many universal metabolic intermediates are quite labile compounds, and without protection will rapidly decompose at elevated temperatures. Among these are aminoacyl-tRNAs that are necessarily formed upon functioning of the translation apparatus. Aminoacyl-tRNAs are known to be hydrolyzed rapidly even at moderate temperatures under mild alkaline conditions. We studied the thermal stability of phenylalanyl- and alanyl-tRNA in aqueous solutions in order to evaluate a potential threat posed by high temperatures to these components of the translation machinery of thermophiles. Specific second-order rate constants of the aminoacyl-tRNA hydrolysis reaction were determined in the range 20 degrees -80 degrees C. The activation energy of phenylalanyl- and alanyl-tRNA hydrolysis was found to be about 42 and 23 kJ/mol, respectively. The calculated half-lives of aminoacyl-tRNAs at sub-80 degrees C temperatures vary from several seconds to several dozens of seconds at near-neutral pH. The possible mechanisms counteracting the observed thermolability of aminoacyl-tRNAs in vivo are discussed.

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Year:  2002        PMID: 12486457     DOI: 10.1007/s00792-002-0285-4

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  3 in total

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Journal:  FEBS Open Bio       Date:  2013-06-11       Impact factor: 2.693

2.  Cellular encoding of Cy dyes for single-molecule imaging.

Authors:  Lilia Leisle; Rahul Chadda; John D Lueck; Daniel T Infield; Jason D Galpin; Venkatramanan Krishnamani; Janice L Robertson; Christopher A Ahern
Journal:  Elife       Date:  2016-12-12       Impact factor: 8.140

3.  Flexizyme-aminoacylated shortened tRNAs demonstrate that only the aminoacylated acceptor arms of the two tRNA substrates are required for cyclodipeptide synthase activity.

Authors:  Nicolas Canu; Carine Tellier; Morgan Babin; Robert Thai; Inès Ajel; Jérôme Seguin; Olivier Cinquin; Robin Vinck; Mireille Moutiez; Pascal Belin; Jean-Christophe Cintrat; Muriel Gondry
Journal:  Nucleic Acids Res       Date:  2020-11-18       Impact factor: 16.971

  3 in total

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