Literature DB >> 12482582

Critical switch of the metabolic fluxes by phosphofructo-2-kinase:fructose-2,6-bisphosphatase. A kinetic model.

Boris N Goldstein1, Andrey A Maevsky.   

Abstract

A kinetic model for the bifunctional enzyme, phosphofructo-2-kinase:fructose-2,6-bisphosphatase, is analysed by application of the graph-theoretical method, considering comparable levels for all participants. Certain elementary reactions, distributed on the enzyme surface, are considered to be co-ordinated in a single conformational transition (a model of parallel molecular operations). The method allows us to identify in the kinetic scheme its destabilising sub-scheme as a branched cycle of elementary reactions. Under certain conditions this sub-scheme induces critical phenomena (bistability or oscillations). The computer calculations for the estimated parameter values fit well the experimental observations for this system. The model explains the periodic or bistable counterphase changes of the two opposing activities of this enzyme, observed after glucose perfusion of rat hepatic enzyme samples, and predicts drastic critical changes in kinetic behaviour induced by small external signals. The model also shows the necessity of the phosphoryl intermediate in the mechanism of the bisphosphatase for the critical kind of kinetic behaviour.

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Year:  2002        PMID: 12482582     DOI: 10.1016/s0014-5793(02)03639-6

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  3 in total

1.  Graph-theoretic methods for the analysis of chemical and biochemical networks. I. Multistability and oscillations in ordinary differential equation models.

Authors:  Maya Mincheva; Marc R Roussel
Journal:  J Math Biol       Date:  2007-05-31       Impact factor: 2.259

2.  A fundamental trade-off in covalent switching and its circumvention by enzyme bifunctionality in glucose homeostasis.

Authors:  Tathagata Dasgupta; David H Croll; Jeremy A Owen; Matthew G Vander Heiden; Jason W Locasale; Uri Alon; Lewis C Cantley; Jeremy Gunawardena
Journal:  J Biol Chem       Date:  2014-03-14       Impact factor: 5.157

3.  GraTeLPy: graph-theoretic linear stability analysis.

Authors:  Georg R Walther; Matthew Hartley; Maya Mincheva
Journal:  BMC Syst Biol       Date:  2014-02-27
  3 in total

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