Literature DB >> 12477501

IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains.

Marie-Paule Lefranc1, Christelle Pommié, Manuel Ruiz, Véronique Giudicelli, Elodie Foulquier, Lisa Truong, Valérie Thouvenin-Contet, Gérard Lefranc.   

Abstract

IMGT, the international ImMunoGeneTics database (http://imgt.cines.fr) is a high quality integrated information system specializing in immunoglobulins (IG), T cell receptors (TR) and major histocompatibility complex (MHC) of human and other vertebrates. IMGT provides a common access to expertly annotated data on the genome, proteome, genetics and structure of the IG and TR, based on the IMGT Scientific chart and IMGT-ONTOLOGY. The IMGT unique numbering defined for the IG and TR variable regions and domains of all jawed vertebrates has allowed a redefinition of the limits of the framework (FR-IMGT) and complementarity determining regions (CDR-IMGT), leading, for the first time, to a standardized description of mutations, allelic polymorphisms, 2D representations (Colliers de Perles) and 3D structures, whatever the antigen receptor, the chain type, or the species. The IMGT numbering has been extended to the V-like domain and is, therefore, highly valuable for comparative analysis and evolution studies of proteins belonging to the IG superfamily.

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Year:  2003        PMID: 12477501     DOI: 10.1016/s0145-305x(02)00039-3

Source DB:  PubMed          Journal:  Dev Comp Immunol        ISSN: 0145-305X            Impact factor:   3.636


  325 in total

1.  IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data.

Authors:  Quentin Kaas; Manuel Ruiz; Marie-Paule Lefranc
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  The KNOTTIN website and database: a new information system dedicated to the knottin scaffold.

Authors:  Jean-Christophe Gelly; Jérôme Gracy; Quentin Kaas; Dung Le-Nguyen; Annie Heitz; Laurent Chiche
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

3.  IMGT, the international ImMunoGeneTics database.

Authors:  Marie-Paule Lefranc
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

4.  IMGT/V-QUEST, an integrated software program for immunoglobulin and T cell receptor V-J and V-D-J rearrangement analysis.

Authors:  Véronique Giudicelli; Denys Chaume; Marie-Paule Lefranc
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

5.  Antiretroviral therapy reduces the magnitude and T cell receptor repertoire diversity of HIV-specific T cell responses without changing T cell clonotype dominance.

Authors:  Joseph A Conrad; Ramesh K Ramalingam; Coley B Duncan; Rita M Smith; Jie Wei; Louise Barnett; Brenna C Simons; Shelly L Lorey; Spyros A Kalams
Journal:  J Virol       Date:  2012-01-18       Impact factor: 5.103

6.  Molecular imprint of enzyme active site by camel nanobodies: rapid and efficient approach to produce abzymes with alliinase activity.

Authors:  Jiang-Wei Li; Lijie Xia; Youhong Su; Hongchun Liu; Xueqing Xia; Qinxia Lu; Chunjin Yang; Kalbinur Reheman
Journal:  J Biol Chem       Date:  2012-02-28       Impact factor: 5.157

7.  A comparison of human and macaque (Macaca mulatta) immunoglobulin germline V regions and its implications for antibody engineering.

Authors:  Philippe Thullier; Siham Chahboun; Thibaut Pelat
Journal:  MAbs       Date:  2010-09-01       Impact factor: 5.857

8.  Antibody nomenclature: from IMGT-ONTOLOGY to INN definition.

Authors:  Marie-Paule Lefranc
Journal:  MAbs       Date:  2011-01-01       Impact factor: 5.857

9.  Structural and comparative analysis of the T cell receptor gamma (TRG) locus in Oryctolagus cuniculus.

Authors:  Serafina Massari; Salvatrice Ciccarese; Rachele Antonacci
Journal:  Immunogenetics       Date:  2012-07-07       Impact factor: 2.846

10.  CD8+ TCR Bias and Immunodominance in HIV-1 Infection.

Authors:  Henrik N Kløverpris; Reuben McGregor; James E McLaren; Kristin Ladell; Mikkel Harndahl; Anette Stryhn; Jonathan M Carlson; Catherine Koofhethile; Bram Gerritsen; Can Keşmir; Fabian Chen; Lynn Riddell; Graz Luzzi; Alasdair Leslie; Bruce D Walker; Thumbi Ndung'u; Søren Buus; David A Price; Philip J Goulder
Journal:  J Immunol       Date:  2015-04-24       Impact factor: 5.422

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