Literature DB >> 12464317

NMR methods for characterizing microsecond to millisecond dynamics in recognition and catalysis.

Mikael Akke1.   

Abstract

During the past two years, significant advances have been made in the development of NMR methods for studying biomolecular dynamics on the microsecond to millisecond timescale. Applications of these methods to biologically relevant systems have provided compelling evidence that, in many cases, conformational dynamics on these timescales govern the rates of biomolecular recognition and catalysis.

Mesh:

Year:  2002        PMID: 12464317     DOI: 10.1016/s0959-440x(02)00369-x

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  36 in total

1.  Off-resonance R1rho relaxation outside of the fast exchange limit: an experimental study of a cavity mutant of T4 lysozyme.

Authors:  Dmitry M Korzhnev; Vladislav Yu Orekhov; Frederick W Dahlquist; Lewis E Kay
Journal:  J Biomol NMR       Date:  2003-05       Impact factor: 2.835

2.  Effects of cavity-forming mutations on the internal dynamics of azurin.

Authors:  Patrizia Cioni; Ellen de Waal; Gerard W Canters; Giovanni B Strambini
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

3.  Kinetics of protein-DNA interaction: facilitated target location in sequence-dependent potential.

Authors:  Michael Slutsky; Leonid A Mirny
Journal:  Biophys J       Date:  2004-10-01       Impact factor: 4.033

Review 4.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

5.  Analysis of side chain mobility among protein G B1 domain mutants with widely varying stabilities.

Authors:  Virginia A Goehlert; Ewa Krupinska; Lynne Regan; Martin J Stone
Journal:  Protein Sci       Date:  2004-11-10       Impact factor: 6.725

6.  Exploring the common dynamics of homologous proteins. Application to the globin family.

Authors:  Sandra Maguid; Sebastian Fernandez-Alberti; Leticia Ferrelli; Julian Echave
Journal:  Biophys J       Date:  2005-03-04       Impact factor: 4.033

7.  Defining the role of active-site loop fluctuations in dihydrofolate reductase catalysis.

Authors:  Dan McElheny; Jason R Schnell; Jonathan C Lansing; H Jane Dyson; Peter E Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-28       Impact factor: 11.205

8.  Transition state theory can be used in studies of enzyme catalysis: lessons from simulations of tunnelling and dynamical effects in lipoxygenase and other systems.

Authors:  Mats H M Olsson; Janez Mavri; Arieh Warshel
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-08-29       Impact factor: 6.237

9.  Measurement of 15N relaxation in the detergent-solubilized tetrameric KcsA potassium channel.

Authors:  Jordan H Chill; John M Louis; James L Baber; Ad Bax
Journal:  J Biomol NMR       Date:  2006-09-20       Impact factor: 2.835

10.  An inserted Gly residue fine tunes dynamics between mesophilic and thermophilic ribonucleases H.

Authors:  Joel A Butterwick; Arthur G Palmer
Journal:  Protein Sci       Date:  2006-11-06       Impact factor: 6.725

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