Literature DB >> 12460284

Prokaryotic phylogenetic diversity and corresponding geochemical data of the brine-seawater interface of the Shaban Deep, Red Sea.

Wolfgang Eder1, Mark Schmidt, Marcus Koch, Dieter Garbe-Schönberg, Robert Huber.   

Abstract

The interface between the hypersaline brine and the overlying sea-water (brine-seawater interface) of the Shaban Deep, northern Red Sea was investigated for the presence of microorganisms using the 16S rRNA gene as a molecular marker. Samples of the south and east basin (depth: 1331 m and 1332 m respectively) were selected to ascertain the microbial diversity of this extreme and, so far, unexplored environment. Phylogenetic analysis revealed novel lineages within the Bacteria, the Crenarchaeota and the Euryarchaeota. Novel representatives of the KB1 sequence group (Eder et al., 1999 Arch Microbiol 172: 213-218) were detected indicating a widespread distribution of the corresponding Bacteria in Deep Sea brine pools. Our results contribute to the understanding of the hitherto unknown microbial diversity at the chemical gradient of the Shaban Deep, and suggest the presence of novel Bacteria and Archaea thriving under extreme environmental conditions.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12460284     DOI: 10.1046/j.1462-2920.2002.00351.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  20 in total

1.  Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing.

Authors:  Pei-Yuan Qian; Yong Wang; On On Lee; Stanley C K Lau; Jiangke Yang; Feras F Lafi; Abdulaziz Al-Suwailem; Tim Y H Wong
Journal:  ISME J       Date:  2010-07-29       Impact factor: 10.302

2.  Rapid phylogenetic dissection of prokaryotic community structure in tidal flat using pyrosequencing.

Authors:  Bong-Soo Kim; Byung Kwon Kim; Jae-Hak Lee; Myungjin Kim; Young Woon Lim; Jongsik Chun
Journal:  J Microbiol       Date:  2008-08-31       Impact factor: 3.422

3.  Archaeal evolution: The methanogenic roots of Archaea.

Authors:  Anja Spang; Thijs J G Ettema
Journal:  Nat Microbiol       Date:  2017-07-25       Impact factor: 17.745

4.  An anaerobic methane-oxidizing community of ANME-1b archaea in hypersaline Gulf of Mexico sediments.

Authors:  Karen G Lloyd; Laura Lapham; Andreas Teske
Journal:  Appl Environ Microbiol       Date:  2006-09-15       Impact factor: 4.792

5.  Methanonatronarchaeum thermophilum gen. nov., sp. nov. and 'Candidatus Methanohalarchaeum thermophilum', extremely halo(natrono)philic methyl-reducing methanogens from hypersaline lakes comprising a new euryarchaeal class Methanonatronarchaeia classis nov.

Authors:  Dimitry Y Sorokin; Alexander Y Merkel; Ben Abbas; Kira S Makarova; W Irene C Rijpstra; M Koenen; Jaap S Sinninghe Damsté; Erwin A Galinski; Eugene V Koonin; Mark C M van Loosdrecht
Journal:  Int J Syst Evol Microbiol       Date:  2018-05-29       Impact factor: 2.747

6.  Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea.

Authors:  Virginia Edgcomb; William Orsi; Chesley Leslin; Slava S Epstein; John Bunge; Sunok Jeon; Michail M Yakimov; Anke Behnke; Thorsten Stoeck
Journal:  Extremophiles       Date:  2008-12-05       Impact factor: 2.395

7.  Subfossil 16S rRNA gene sequences of green sulfur bacteria in the Black Sea and their implications for past photic zone anoxia.

Authors:  Ann K Manske; Uta Henssge; Jens Glaeser; Jörg Overmann
Journal:  Appl Environ Microbiol       Date:  2007-11-26       Impact factor: 4.792

8.  Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea.

Authors:  David Kamanda Ngugi; Jochen Blom; Intikhab Alam; Mamoon Rashid; Wail Ba-Alawi; Guishan Zhang; Tyas Hikmawan; Yue Guan; Andre Antunes; Rania Siam; Hamza El Dorry; Vladimir Bajic; Ulrich Stingl
Journal:  ISME J       Date:  2014-08-08       Impact factor: 10.302

9.  A new lineage of halophilic, wall-less, contractile bacteria from a brine-filled deep of the Red Sea.

Authors:  André Antunes; Fred A Rainey; Gerhard Wanner; Marco Taborda; Jürgen Pätzold; M Fernanda Nobre; Milton S da Costa; Robert Huber
Journal:  J Bacteriol       Date:  2008-03-07       Impact factor: 3.490

10.  Unique prokaryotic consortia in geochemically distinct sediments from Red Sea Atlantis II and discovery deep brine pools.

Authors:  Rania Siam; Ghada A Mustafa; Hazem Sharaf; Ahmed Moustafa; Adham R Ramadan; Andre Antunes; Vladimir B Bajic; Uli Stingl; Nardine G R Marsis; Marco J L Coolen; Mitchell Sogin; Ari J S Ferreira; Hamza El Dorry
Journal:  PLoS One       Date:  2012-08-20       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.