Literature DB >> 12454501

Structure of the Humicola insolens cellobiohydrolase Cel6A D416A mutant in complex with a non-hydrolysable substrate analogue, methyl cellobiosyl-4-thio-beta-cellobioside, at 1.9 A.

Annabelle Varrot1, Torben P Frandsen, Hugues Driguez, Gideon J Davies.   

Abstract

The enzymatic degradation of cellulose continues to be one of the most important enzyme-catalysed reactions. Glycoside hydrolases from family GH-6 hydrolyse cellulose with inversion of the configuration of the anomeric carbon. Whilst the catalytic proton donor has been clearly identified (Asp226 in Humicola insolens Cel6A), the identification and even the existence of a potential Brønsted base remains unclear. Equally controversial is the role of surface-loop flexibility. Here, the structure of the D416A mutant of the H. insolens cellobiohydrolase Cel6A in complex with a non-hydrolysable thiooligosaccharide methyl cellobiosyl-4-thio-beta-cellobioside at 1.9 A resolution is presented. Substrate distortion in the -1 subsite, to a (2)S(0) skew-boat conformation, is observed, similar to that seen in the analogous Trichoderma reesei Cel6A structure [Zou et al. (1999), Structure, 7, 1035-1045], but the active-centre N-terminal loop of the H. insolens enzyme is found in a more open conformation than described for previous structures.

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Year:  2002        PMID: 12454501     DOI: 10.1107/s0907444902017006

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

Review 1.  Genomics review of holocellulose deconstruction by aspergilli.

Authors:  Fernando Segato; André R L Damásio; Rosymar C de Lucas; Fabio M Squina; Rolf A Prade
Journal:  Microbiol Mol Biol Rev       Date:  2014-12       Impact factor: 11.056

2.  Characterization of a cellobiohydrolase (MoCel6A) produced by Magnaporthe oryzae.

Authors:  Machiko Takahashi; Hideyuki Takahashi; Yuki Nakano; Teruko Konishi; Ryohei Terauchi; Takumi Takeda
Journal:  Appl Environ Microbiol       Date:  2010-08-13       Impact factor: 4.792

3.  Cloning and functional characterization of endo-β-1,4-glucanase gene from metagenomic library of vermicompost.

Authors:  Muhammad Yasir; Haji Khan; Syed Sikander Azam; Amar Telke; Seon Won Kim; Young Ryun Chung
Journal:  J Microbiol       Date:  2013-06-28       Impact factor: 3.422

4.  Loop motions important to product expulsion in the Thermobifida fusca glycoside hydrolase family 6 cellobiohydrolase from structural and computational studies.

Authors:  Miao Wu; Lintao Bu; Thu V Vuong; David B Wilson; Michael F Crowley; Mats Sandgren; Jerry Ståhlberg; Gregg T Beckham; Henrik Hansson
Journal:  J Biol Chem       Date:  2013-09-30       Impact factor: 5.157

5.  Who's on base? Revealing the catalytic mechanism of inverting family 6 glycoside hydrolases.

Authors:  Heather B Mayes; Brandon C Knott; Michael F Crowley; Linda J Broadbelt; Jerry Ståhlberg; Gregg T Beckham
Journal:  Chem Sci       Date:  2016-06-01       Impact factor: 9.825

6.  Cellulase linkers are optimized based on domain type and function: insights from sequence analysis, biophysical measurements, and molecular simulation.

Authors:  Deanne W Sammond; Christina M Payne; Roman Brunecky; Michael E Himmel; Michael F Crowley; Gregg T Beckham
Journal:  PLoS One       Date:  2012-11-06       Impact factor: 3.240

  6 in total

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