Literature DB >> 12454462

Structure of mutant human carbonmonoxyhemoglobin C (betaE6K) at 2.0 A resolution.

John C Dewan1, Angela Feeling-Taylor, Yoram A Puius, Larysa Patskovska, Yury Patskovsky, Ronald L Nagel, Steven C Almo, Rhoda Elison Hirsch.   

Abstract

Previous studies have demonstrated that in vitro crystallization of R-state liganded hemoglobin C (HbC), a naturally occurring mutant human hemoglobin (betaE6K), in high-phosphate buffer solutions provides a potential model system for the intracellular crystallization of HbC associated with chronic hemolytic anemia in CC disease. The first high-resolution crystal structure of liganded HbC is reported here. HbC was crystallized from high phosphate and the structure of the carbonmonoxy-liganded R-state form was refined at 2.0 A resolution. Crystals exhibit diffraction consistent with the tetragonal space group P4(1)2(1)2, with unit-cell parameters a = 54.16, c = 195.30 A. The structure was solved by difference Fourier techniques and refinement by simulated annealing and restrained least-squares yielded a final R of 0.183 and an R(free) of 0.238 for all 19,382 unique reflections. The side chain of betaK6 exhibits very weak electron density consistent with significant mobility within the crystalline lattice. The highly dynamic nature of the side chain could potentially support a number of specific polar interactions that might reduce the barrier to crystallization and thus result in enhanced crystallization kinetics for HbC relative to HbA. Specifically, the NZ atom of the BK6 side chain could participate in an amino-aromatic hydrogen bond with the pi-electron cloud of betaH116 in a symmetry-related tetramer. BetaK6 NZ might also interact with the main-chain carbonyl O atom of betaH117 and the carboxylate group of betaE22 from a symmetry-related tetramer.

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Year:  2002        PMID: 12454462     DOI: 10.1107/s0907444902016426

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  4 in total

1.  Crystallization mechanisms of hemoglobin C in the R state.

Authors:  Angela R Feeling-Taylor; S-T Yau; Dimiter N Petsev; Ronald L Nagel; Rhoda Elison Hirsch; Peter G Vekilov
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

2.  Structures and oxygen affinities of crystalline human hemoglobin C (β6 Glu->Lys) in the R and R2 quaternary structures.

Authors:  Naoya Shibayama; Kanako Sugiyama; Sam-Yong Park
Journal:  J Biol Chem       Date:  2011-08-04       Impact factor: 5.157

3.  Phase separation and crystallization of hemoglobin C in transgenic mouse and human erythrocytes.

Authors:  Joseph E Canterino; Oleg Galkin; Peter G Vekilov; Rhoda Elison Hirsch
Journal:  Biophys J       Date:  2008-07-11       Impact factor: 4.033

4.  Direct observation of ligand migration within human hemoglobin at work.

Authors:  Naoya Shibayama; Ayana Sato-Tomita; Mio Ohki; Kouhei Ichiyanagi; Sam-Yong Park
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-18       Impact factor: 11.205

  4 in total

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