Literature DB >> 12449768

Handling non-negativity in deconvolution of physiological signals: a nonlinear stochastic approach.

Gianluigi Pillonetto1, Giovanni Sparacino, Claudio Cobelli.   

Abstract

A stochastic interpretation of Tikhonov regularization has been recently proposed to attack some open problems of deconvolution when dealing with physiological systems, i.e., in addition to ill-conditioning, infrequent and nonuniform sampling and necessity of having credible confidence intervals. However, the possible violation of the non-negativity constraint cannot be dealt with on firm statistical grounds, since the model of the unknown signal is compatible with negative realizations. In this paper, we propose a new model of the unknown input which excludes negative values. The model is embedded within a Bayesian estimation framework to calculate, by resorting to a Markov chain Monte Carlo algorithm, a nonlinear estimate of the unknown input given by its a posteriori expected value. Applications to simulated and real hormone secretion/pharmacokinetic problems are presented which show that this nonlinear approach is more accurate than the linear one. In addition, more realistic confidence intervals are obtained.

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Year:  2002        PMID: 12449768     DOI: 10.1114/1.1510449

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  3 in total

1.  An efficient deconvolution algorithm for estimating oxygen consumption during muscle activities.

Authors:  Ranjan K Dash; Erkki Somersalo; Marco E Cabrera; Daniela Calvetti
Journal:  Comput Methods Programs Biomed       Date:  2007-01-31       Impact factor: 5.428

2.  Input Estimation for Extended-Release Formulations Exemplified with Exenatide.

Authors:  Magnus Trägårdh; Michael J Chappell; Johan E Palm; Neil D Evans; David L I Janzén; Peter Gennemark
Journal:  Front Bioeng Biotechnol       Date:  2017-04-19

3.  Input estimation for drug discovery using optimal control and Markov chain Monte Carlo approaches.

Authors:  Magnus Trägårdh; Michael J Chappell; Andrea Ahnmark; Daniel Lindén; Neil D Evans; Peter Gennemark
Journal:  J Pharmacokinet Pharmacodyn       Date:  2016-03-01       Impact factor: 2.745

  3 in total

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