Literature DB >> 12446790

Interdependent interactions between TFIIB, TATA binding protein, and DNA.

Robin M Buratowski1, Jessica Downs, Stephen Buratowski.   

Abstract

Temperature-sensitive mutants of TFIIB that are defective for essential interactions were isolated. One mutation (G204D) results in disruption of a protein-protein contact between TFIIB and TATA binding protein (TBP), while the other (K272I) disrupts an interaction between TFIIB and DNA. The TBP gene was mutagenized, and alleles that suppress the slow-growth phenotypes of the TFIIB mutants were isolated. TFIIB with the G204D mutation [TFIIB(G204D)] was suppressed by hydrophobic substitutions at lysine 239 of TBP. These changes led to increased affinity between TBP and TFIIB. TFIIB(K272I) was weakly suppressed by TBP mutants in which K239 was changed to hydrophobic residues. However, this mutant TFIIB was strongly suppressed by conservative substitutions in the DNA binding surface of TBP. Biochemical characterization showed that these TBP mutants had increased affinity for a TATA element. The TBPs with increased affinity could not suppress TFIIB(G204D), leading us to propose a two-step model for the interaction between TFIIB and the TBP-DNA complex.

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Year:  2002        PMID: 12446790      PMCID: PMC139873          DOI: 10.1128/MCB.22.24.8735-8743.2002

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  45 in total

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Journal:  Genes Dev       Date:  1996-11-01       Impact factor: 11.361

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Authors:  J L Kim; D B Nikolov; S K Burley
Journal:  Nature       Date:  1993-10-07       Impact factor: 49.962

3.  Functional dissection of TFIIB domains required for TFIIB-TFIID-promoter complex formation and basal transcription activity.

Authors:  K Hisatake; R G Roeder; M Horikoshi
Journal:  Nature       Date:  1993-06-24       Impact factor: 49.962

4.  Interaction between the N-terminal domain of the 230-kDa subunit and the TATA box-binding subunit of TFIID negatively regulates TATA-box binding.

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Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-26       Impact factor: 11.205

5.  Regional codon randomization: defining a TATA-binding protein surface required for RNA polymerase III transcription.

Authors:  B P Cormack; K Struhl
Journal:  Science       Date:  1993-10-08       Impact factor: 47.728

6.  Crystal structure of yeast TATA-binding protein and model for interaction with DNA.

Authors:  D I Chasman; K M Flaherty; P A Sharp; R D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

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Authors:  I Pinto; W H Wu; J G Na; M Hampsey
Journal:  J Biol Chem       Date:  1994-12-02       Impact factor: 5.157

8.  Yeast TATA binding protein interaction with DNA: fluorescence determination of oligomeric state, equilibrium binding, on-rate, and dissociation kinetics.

Authors:  G M Perez-Howard; P A Weil; J M Beechem
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Authors:  S Buratowski; H Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-15       Impact factor: 11.205

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Authors:  I Ha; S Roberts; E Maldonado; X Sun; L U Kim; M Green; D Reinberg
Journal:  Genes Dev       Date:  1993-06       Impact factor: 11.361

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  7 in total

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5.  Characterization of new Spt3 and TATA-binding protein mutants of Saccharomyces cerevisiae: Spt3 TBP allele-specific interactions and bypass of Spt8.

Authors:  Lisa Laprade; David Rose; Fred Winston
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

6.  A TATA binding protein mutant with increased affinity for DNA directs transcription from a reversed TATA sequence in vivo.

Authors:  J Vaughn Spencer; Karen M Arndt
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

7.  Tracking transcription factor complexes on DNA using total internal reflectance fluorescence protein binding microarrays.

Authors:  Andrew J Bonham; Thorsten Neumann; Matthew Tirrell; Norbert O Reich
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  7 in total

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